RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 APOEP02649 317 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 PDE6CP51160 858 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 STX1BP61266 288 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 AOC3Q16853 763 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 REXO1Q8N1G1 1221 aaKnown RBP15.83■□□□□ 0.12
PTPN13-203ENST00000427191 OATP04181 439 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 ATF2P15336 505 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 BPIFB4P59827 614 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 FGFR1OP2Q9NVK5 253 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 ARHGEF12Q9NZN5 1544 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 GNGT1P63211 74 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 TCEANC2Q96MN5 208 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 CBX8Q9HC52 389 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 PIK3AP1Q6ZUJ8 805 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 IVNS1ABPQ9Y6Y0 642 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 RSBN1LQ6PCB5 846 aaPredicted RBP15.82■□□□□ 0.12
PTPN13-203ENST00000427191 TEX11Q8IYF3 940 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 CCDC197Q8NCU1 140 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 MRRFQ96E11 262 aaKnown RBP15.82■□□□□ 0.12
PTPN13-203ENST00000427191 KRT10P13645 584 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 SEPT2Q15019 361 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 SEPT8Q92599 483 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 APPBP2Q92624 585 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 C1orf112Q9NSG2 853 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 ANGPTL2Q9UKU9 493 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 RTCBQ9Y3I0 505 aaKnown RBP15.82■□□□□ 0.12
PTPN13-203ENST00000427191 SERPINI1Q99574 410 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 PARP3Q9Y6F1 533 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 MAP7D3Q8IWC1 876 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 PLXNC1O60486 1568 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 ESYT2A0FGR8 921 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 BEND3Q5T5X7 828 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
PTPN13-203ENST00000427191 SCOCQ9UIL1 159 aa15.82■□□□□ 0.12
PTPN13-203ENST00000427191 ZNF449Q6P9G9 518 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 CNPY4Q8N129 248 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 MAP3K7CLP57077 242 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 MID2Q9UJV3 735 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 USTQ9Y2C2 406 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 SKIP12755 728 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 RPAINQ86UA6 219 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 PLCD3Q8N3E9 789 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 RNF14Q9UBS8 474 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 TPX2Q9ULW0 747 aaKnown RBP15.81■□□□□ 0.12
PTPN13-203ENST00000427191 IRS4O14654 1257 aaPredicted RBP15.81■□□□□ 0.12
PTPN13-203ENST00000427191 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 C10orf76Q5T2E6 689 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 ANAPC5Q9UJX4 755 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 ZMYM4Q5VZL5 1548 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 LMNAP02545 664 aaKnown RBP15.81■□□□□ 0.12
PTPN13-203ENST00000427191 HARSP12081 509 aaKnown RBP15.81■□□□□ 0.12
PTPN13-203ENST00000427191 PDXDC1Q6P996 788 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 EP400NLQ6ZTU2 488 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 PARD3Q8TEW0 1356 aa15.81■□□□□ 0.12
PTPN13-203ENST00000427191 BAG2O95816 211 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 JRKLQ9Y4A0 524 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 TYW5A2RUC4 315 aaKnown RBP15.8■□□□□ 0.12
PTPN13-203ENST00000427191 ARHGEF18Q6ZSZ5 1173 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 BBS5Q8N3I7 341 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 ACEP12821 1306 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 TTC25Q96NG3 672 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 H7C1D1 291 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PYGLP06737 847 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 CD19P15391 556 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PDE6BP35913 854 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-203ENST00000427191 SLC27A2O14975 620 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 MBD4O95243 580 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 HSPA6P17066 643 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PODNQ7Z5L7 613 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 ZBED4O75132 1171 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 F8W031 263 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-203ENST00000427191 MX2P20592 715 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 TFCP2Q12800 502 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 RRAGAQ7L523 313 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 SCYL1Q96KG9 808 aa15.8■□□□□ 0.12
PTPN13-203ENST00000427191 PACSIN2Q9UNF0 486 aaPredicted RBP15.8■□□□□ 0.12
PTPN13-203ENST00000427191 DISP3Q9P2K9 1392 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 KCNJ18B7U540 433 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 CDC25BP30305 580 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 KCNJ12Q14500 433 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 CALR3Q96L12 384 aaKnown RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 TNNC2P02585 160 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 TYW1BQ6NUM6 668 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 PDCD7Q8N8D1 485 aaKnown RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 MGARPQ8TDB4 240 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 TBC1D22AQ8WUA7 517 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 ACTR5Q9H9F9 607 aaPredicted RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
PTPN13-203ENST00000427191 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 NLRX1Q86UT6 975 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 CUEDC2Q9H467 287 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 TEKT2Q9UIF3 430 aa15.79■□□□□ 0.12
PTPN13-203ENST00000427191 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms