RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 MB21D1Q8N884 522 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 IL17RBQ9NRM6 502 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 CCDC171Q6TFL3 1326 aa21.8■■□□□ 1.08
SMARCAL1-205ENST00000425815 RLFQ13129 1914 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 SLC15A5A6NIM6 579 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 TSPY3P0CV98 308 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 TSPY8P0CW00 308 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 ERCC3P19447 782 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 RGS2P41220 211 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 GRB14Q14449 540 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 MAP3K21Q5TCX8 1036 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 REPS2Q8NFH8 660 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 FLRT1Q9NZU1 646 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 PPP1R9AQ9ULJ8 1098 aa21.79■■□□□ 1.08
SMARCAL1-205ENST00000425815 VWA5AO00534 786 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 RAD21O60216 631 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 TTLL1O95922 423 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 IGHA2P01877 340 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 GSPT1P15170 499 aaKnown RBP21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 WDR78Q5VTH9 848 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 SAMD1Q6SPF0 538 aaPredicted RBP21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 SHCBP1Q8NEM2 672 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 NPLOC4Q8TAT6 608 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 DEFB118Q96PH6 123 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 NBPF3Q9H094 633 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 CRISPLD2Q9H0B8 497 aa21.78■■□□□ 1.08
SMARCAL1-205ENST00000425815 NMT2O60551 498 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 HOXC6P09630 235 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 NOVP48745 357 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 LRRC47Q8N1G4 583 aaKnown RBP21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 GMCL1P1Q8NEA9 526 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 APBA2Q99767 749 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 SYNPO2Q9UMS6 1093 aa21.77■■□□□ 1.08
SMARCAL1-205ENST00000425815 RPTORQ8N122 1335 aa21.77■■□□□ 1.07
SMARCAL1-205ENST00000425815 ORC4O43929 436 aa21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 CACNB2Q08289 660 aaPredicted RBP21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 TRMT44Q8IYL2 757 aaKnown RBP21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 IL25Q9H293 177 aa21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 CWC22Q9HCG8 908 aaKnown RBP21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
SMARCAL1-205ENST00000425815 COBLO75128 1261 aa21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 PLS1Q14651 629 aa21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 TTC22Q5TAA0 569 aa21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 HMX1Q9NP08 348 aaPredicted RBP21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 ZNF214Q9UL59 606 aaPredicted RBP21.75■■□□□ 1.07
SMARCAL1-205ENST00000425815 MYH8P13535 1937 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 TSPY2A6NKD2 308 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 STRNO43815 780 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 TFRCP02786 760 aaKnown RBP21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 PRKAR2AP13861 404 aaKnown RBP21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 ADORA2AP29274 412 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 HAND2P61296 217 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 SLFN13Q68D06 897 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 NCAPG2Q86XI2 1143 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 SLF1Q9BQI6 1058 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 MROH8Q9H579 483 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 DIAPH3Q9NSV4 1193 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 IVNS1ABPQ9Y6Y0 642 aa21.74■■□□□ 1.07
SMARCAL1-205ENST00000425815 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
SMARCAL1-205ENST00000425815 STAT3P40763 770 aa21.73■■□□□ 1.07
SMARCAL1-205ENST00000425815 PRPF38BQ5VTL8 546 aaKnown RBP21.73■■□□□ 1.07
SMARCAL1-205ENST00000425815 RIOX2Q8IUF8 465 aa21.73■■□□□ 1.07
SMARCAL1-205ENST00000425815 A0A0G2JMZ2 1700 aa21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 HIP1O00291 1037 aa21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 SLC25A27O95847 323 aa21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 CCND3P30281 292 aaPredicted RBP21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 MNX1P50219 401 aaPredicted RBP21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 TBC1D10CQ8IV04 446 aa21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 PRPF38AQ8NAV1 312 aaKnown RBP21.72■■□□□ 1.07
SMARCAL1-205ENST00000425815 BMP3P12645 472 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 LHX8Q68G74 356 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 ABRAQ8N0Z2 381 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 FEM1BQ9UK73 627 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 STX8Q9UNK0 236 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 RIPK3Q9Y572 518 aa21.71■■□□□ 1.07
SMARCAL1-205ENST00000425815 FARP2O94887 1054 aaPredicted RBP21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 MCCP23508 829 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 RRP12Q5JTH9 1297 aaKnown RBP21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 AKNAD1Q5T1N1 836 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 RASGRP2Q7LDG7 609 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 DPP9Q86TI2 863 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 STAG1Q8WVM7 1258 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 CHMP4CQ96CF2 233 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 GMCL1Q96IK5 515 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 TCP11L1Q9NUJ3 509 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 OGDHLQ9ULD0 1010 aa21.7■■□□□ 1.06
SMARCAL1-205ENST00000425815 ATP2A1O14983 1001 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 CAPN2P17655 700 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 CYP2C19P33261 490 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 TRPV1Q8NER1 839 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 KIFC2Q96AC6 838 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 DSCC1Q9BVC3 393 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 SLC38A10Q9HBR0 1119 aa21.69■■□□□ 1.06
SMARCAL1-205ENST00000425815 TMEM232C9JQI7 657 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 FCER1AP12319 257 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms