RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 ATP2C1P98194 919 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 RBM28Q9NW13 759 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 HDAC6Q9UBN7 1215 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 JAG2Q9Y219 1238 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 LAMB4A4D0S4 1761 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 NUP188Q5SRE5 1749 aa8.49□□□□□ -1.05
SMARCC1-202ENST00000425518 VGLL3A8MV65 326 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 EXOC5O00471 708 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 SEMA3EO15041 775 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 GTPBP6O43824 516 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 EIF3JO75822 258 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 RPN1P04843 607 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 STAT6P42226 847 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 ARHGAP25P42331 645 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 PRCPP42785 496 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 RCAN1P53805 252 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 SPAG1Q07617 926 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 IL17AQ16552 155 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 SKIDA1Q1XH10 827 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 TMTC3Q6ZXV5 915 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 CAPZA3Q96KX2 299 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 GDAP1L1Q96MZ0 367 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 HINFPQ9BQA5 517 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 MTA3Q9BTC8 594 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 LIMA1Q9UHB6 759 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 RWDD2AQ9UIY3 292 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 L1RE1Q9UN81 338 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 PKD1L3Q7Z443 1732 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 SRGAP2O75044 1071 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 CASP8Q14790 479 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 EXOC4Q96A65 974 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 ACSBG1Q96GR2 724 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 LUC7L2Q9Y383 392 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 TTC26A0AVF1 554 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 PP2D1A8MPX8 630 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 NPY5RQ15761 445 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 E2F4Q16254 413 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 WHAMMP3Q1A5X7 153 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.053e-6■□□□□ 9.3
SMARCC1-202ENST00000425518 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 NID2Q14112 1375 aa8.48□□□□□ -1.05
SMARCC1-202ENST00000425518 ZMYND10O75800 440 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 NDUFA10O95299 355 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 PARP1P09874 1014 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CALM1P0DP23 149 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CALM2P0DP24 149 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CALM3P0DP25 149 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CYP2D6P10635 497 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 SCG2P13521 617 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 ZNF658Q5TYW1 1059 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 PDXDC2PQ6P474 469 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CTR9Q6PD62 1173 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 LEKR1Q6ZMV7 388 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 MSANTD4Q8NCY6 345 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 OR8K1Q8NGG5 319 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 HNRNPLLQ8WVV9 542 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 RAB21Q9UL25 225 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 LRRC10BA6NIK2 292 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 EIF5P55010 431 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 TUBB2AQ13885 445 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CAVIN4Q5BKX8 364 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CCDC122Q5T0U0 273 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 KIAA1328Q86T90 577 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 TNFRSF25Q93038 417 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 TRIM47Q96LD4 638 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 TUBB2BQ9BVA1 445 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 ANAPC4Q9UJX5 808 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 ITIH6Q6UXX5 1313 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 GTF2E1P29083 439 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 C10orf67Q8IYJ2 551 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CCDC148Q8NFR7 591 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 GBP3Q9H0R5 595 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 CWC15Q9P013 229 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 MAGEC2Q9UBF1 373 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-202ENST00000425518 UBA7P41226 1012 aa8.46□□□□□ -1.05
SMARCC1-202ENST00000425518 PMS1P54277 932 aaKnown RBP8.46□□□□□ -1.05
SMARCC1-202ENST00000425518 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.05
SMARCC1-202ENST00000425518 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.05
SMARCC1-202ENST00000425518 CNTNAP5Q8WYK1 1306 aa8.46□□□□□ -1.05
SMARCC1-202ENST00000425518 H7C1D1 291 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 TULP2O00295 520 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 TRIM66O15016 1216 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 ACTN2P35609 894 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 USP5P45974 858 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 CRKLP46109 303 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 ANKRD18AQ8IVF6 992 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 MB21D1Q8N884 522 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 REXO2Q9Y3B8 237 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC194A0A1B0GVG4 234 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 LRRIQ3A6PVS8 624 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 DDAH1O94760 285 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms