RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
SGCE-203ENST00000425444 AAMPQ13685 434 aa15.25■□□□□ 0.03
SGCE-203ENST00000425444 OTUD7AQ8TE49 926 aaPredicted RBP15.25■□□□□ 0.03
SGCE-203ENST00000425444 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
SGCE-203ENST00000425444 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 RNF113AO15541 343 aaKnown RBP15.24■□□□□ 0.03
SGCE-203ENST00000425444 GABPAQ06546 454 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 WDR78Q5VTH9 848 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 POTEEQ6S8J3 1075 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 PI4K2BQ8TCG2 481 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 APPBP2Q92624 585 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 TIFAQ96CG3 184 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 HCN4Q9Y3Q4 1203 aa15.24■□□□□ 0.03
SGCE-203ENST00000425444 TCF20Q9UGU0 1960 aaKnown RBP15.24■□□□□ 0.03
SGCE-203ENST00000425444 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.23■□□□□ 0.03
SGCE-203ENST00000425444 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.23■□□□□ 0.03
SGCE-203ENST00000425444 CYP2C19P33261 490 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 USP14P54578 494 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 EPHB4P54760 987 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 CCDC85BQ15834 202 aaPredicted RBP15.23■□□□□ 0.03
SGCE-203ENST00000425444 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
SGCE-203ENST00000425444 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
SGCE-203ENST00000425444 TRANK1O15050 2925 aa15.23■□□□□ 0.03
SGCE-203ENST00000425444 CYP2D7A0A087X1C5 515 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 USP17L12C9JPN9 530 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 USP17L21D6R901 530 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 GPAA1O43292 621 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 ITGB8P26012 769 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 TLE2Q04725 743 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 SEPT2Q15019 361 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 SNX17Q15036 470 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 AKNAD1Q5T1N1 836 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 ANO1Q5XXA6 986 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 TRPV1Q8NER1 839 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 FERMT2Q96AC1 680 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 EMILIN3Q9NT22 766 aa15.22■□□□□ 0.03
SGCE-203ENST00000425444 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
SGCE-203ENST00000425444 SLC15A5A6NIM6 579 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 ADCYAP1R1P41586 468 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 CCNA1P78396 465 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 TMEM179Q6ZVK1 233 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 NECAB3Q96P71 396 aaPredicted RBP15.21■□□□□ 0.03
SGCE-203ENST00000425444 STRBPQ96SI9 672 aaKnown RBP15.21■□□□□ 0.03
SGCE-203ENST00000425444 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
SGCE-203ENST00000425444 PRDM12Q9H4Q4 367 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 TACC3Q9Y6A5 838 aa15.21■□□□□ 0.03
SGCE-203ENST00000425444 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.02
SGCE-203ENST00000425444 APPP05067 770 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 RAG1P15918 1043 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 GNAT2P19087 354 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 TDO2P48775 406 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 B4GALNT3Q6L9W6 998 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 CTR9Q6PD62 1173 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
SGCE-203ENST00000425444 IVNS1ABPQ9Y6Y0 642 aa15.2■□□□□ 0.02
SGCE-203ENST00000425444 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L15C9J2P7 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L13C9JLJ4 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L11C9JVI0 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L18D6R9N7 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L22D6RA61 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L17D6RBQ6 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L19D6RCP7 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L20D6RJB6 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 SMIM22K7EJ46 135 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 M0R2C6 588 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 CLTBP09497 229 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 HOXC6P09630 235 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 CYBAP13498 195 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 AKR1B1P15121 316 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 VCAM1P19320 739 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 IGFBP4P22692 258 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 PTPREP23469 700 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 GUCY1A2P33402 732 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 CDK8P49336 464 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 FPGSQ05932 587 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 USP17L24Q0WX57 530 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 ARHGEF10LQ9HCE6 1279 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 MYH8P13535 1937 aa15.19■□□□□ 0.02
SGCE-203ENST00000425444 GSG1L2A8MUP6 293 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 PDE1AP54750 535 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 ICA1Q05084 483 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 C1orf53Q5VUE5 145 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
SGCE-203ENST00000425444 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms