RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TRAF1Q13077 416 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 MAP3K11Q16584 847 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
MDC1-205ENST00000425072 USP17L2Q6R6M4 530 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
MDC1-205ENST00000425072 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
MDC1-205ENST00000425072 CHURC1Q8WUH1 139 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 LPAR1Q92633 364 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 GLIS2Q9BZE0 524 aaPredicted RBP11.97□□□□□ -0.49
MDC1-205ENST00000425072 VCPKMTQ9H867 229 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 MTMR7Q9Y216 660 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 GREB1LQ9C091 1923 aaPredicted RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 RAD21O60216 631 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 JAK2O60674 1132 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 BMP3P12645 472 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 FDPSP14324 419 aaKnown RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 PTPRAP18433 802 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 PRKG1Q13976 671 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 SRBD1Q8N5C6 995 aaKnown RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 C2orf69Q8N8R5 385 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 ZNF280CQ8ND82 737 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 ZKSCAN4Q969J2 545 aaPredicted RBP11.96□□□□□ -0.49
MDC1-205ENST00000425072 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 FEZ1Q99689 392 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 KIAA1683Q9H0B3 1180 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.49
MDC1-205ENST00000425072 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 PLA2G6O60733 806 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 SPP2Q13103 211 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 SAFBQ15424 915 aaKnown RBP eCLIP11.95□□□□□ -0.5
MDC1-205ENST00000425072 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 ERO1BQ86YB8 467 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 FBXO18Q8NFZ0 1043 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 ACER1Q8TDN7 264 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 PHKBQ93100 1093 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 RRP36Q96EU6 259 aaKnown RBP11.95□□□□□ -0.5
MDC1-205ENST00000425072 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 ZSCAN16Q9H4T2 348 aaPredicted RBP11.95□□□□□ -0.5
MDC1-205ENST00000425072 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
MDC1-205ENST00000425072 SEC63Q9UGP8 760 aaKnown RBP11.95□□□□□ -0.5
MDC1-205ENST00000425072 CXCL11O14625 94 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 BRD1O95696 1058 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 NDUFB10O96000 172 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 ZSCAN22P10073 491 aaPredicted RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 ECE1P42892 770 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 BACE1P56817 501 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 PPATQ06203 517 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 FUT2Q10981 343 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 CCDC12Q8WUD4 166 aaPredicted RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 SH3GLB2Q9NR46 395 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
MDC1-205ENST00000425072 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
MDC1-205ENST00000425072 PNMA6FA0A0J9YX94 578 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 FDX1P10109 184 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 SCG2P13521 617 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 HTRA3P83110 453 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
MDC1-205ENST00000425072 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
MDC1-205ENST00000425072 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
MDC1-205ENST00000425072 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
MDC1-205ENST00000425072 LDLRAD1Q5T700 205 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
MDC1-205ENST00000425072 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 TMOD4Q9NZQ9 345 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 MYH6P13533 1939 aa11.93□□□□□ -0.5
MDC1-205ENST00000425072 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
MDC1-205ENST00000425072 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
MDC1-205ENST00000425072 TMEM232C9JQI7 657 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
MDC1-205ENST00000425072 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 CALML3P27482 149 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 DSG3P32926 999 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 VGLL4Q14135 290 aa11.92□□□□□ -0.5
MDC1-205ENST00000425072 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms