RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 PLCL1Q15111 1095 aa6.1□□□□□ -1.43
HDAC9-209ENST00000425071 TCEAL1Q15170 157 aa6.1□□□□□ -1.43
HDAC9-209ENST00000425071 SF3A1Q15459 793 aaKnown RBP6.1□□□□□ -1.43
HDAC9-209ENST00000425071 ZYXQ15942 572 aaKnown RBP6.1□□□□□ -1.43
HDAC9-209ENST00000425071 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
HDAC9-209ENST00000425071 LTBP3Q9NS15 1303 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 NAT2P11245 290 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 ZNF143P52747 638 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-209ENST00000425071 NCAPHQ15003 741 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 GNPTABQ3T906 1256 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-209ENST00000425071 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 SYTL4Q96C24 671 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-209ENST00000425071 PRDM14Q9GZV8 571 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 ACTR10Q9NZ32 417 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 DUSP13Q9UII6 198 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 FBXL21Q9UKT6 434 aa6.09□□□□□ -1.43
HDAC9-209ENST00000425071 R3HCC1Q9Y3T6 440 aaKnown RBP6.09□□□□□ -1.43
HDAC9-209ENST00000425071 OAS3Q9Y6K5 1087 aaKnown RBP6.09□□□□□ -1.43
HDAC9-209ENST00000425071 C9IYK1 514 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
HDAC9-209ENST00000425071 ESR1P03372 595 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 ATP2B1P20020 1258 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 ABI1Q8IZP0 508 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 ZNF512BQ96KM6 892 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-209ENST00000425071 HDAC8Q9BY41 377 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 TANGO6Q9C0B7 1094 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 ZNF408Q9H9D4 720 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 MRVI1Q9Y6F6 885 aa6.08□□□□□ -1.44
HDAC9-209ENST00000425071 FAM86C2PA6NEL3 165 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 CD247P20963 164 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 ETFBP38117 255 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 CD96P40200 585 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 FXNQ16595 210 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
HDAC9-209ENST00000425071 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-209ENST00000425071 RNF111Q6ZNA4 994 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 PPFIBP1Q86W92 1011 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 CREG2Q8IUH2 290 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 LINC00116Q8NCU8 138 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 GBP3Q9H0R5 595 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 CARS2Q9HA77 564 aaKnown RBP6.07□□□□□ -1.44
HDAC9-209ENST00000425071 WHRNQ9P202 907 aa6.07□□□□□ -1.44
HDAC9-209ENST00000425071 SHISA3A0PJX4 238 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 BIN1O00499 593 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 STK10O94804 968 aaKnown RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 PRAMEF1O95521 474 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 TP53P04637 393 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 GSNP06396 782 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 ITGA4P13612 1032 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 LTKP29376 864 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 IRAK1P51617 712 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 PCBP3P57721 371 aaKnown RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 EGR3Q06889 387 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 ZNF792Q3KQV3 632 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 NBPF6Q5VWK0 638 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 HEATR6Q6AI08 1181 aaKnown RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 VHLLQ6RSH7 139 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 CBLL1Q75N03 491 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 TMC3Q7Z5M5 1100 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 DHX38Q92620 1227 aaKnown RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 TCTN2Q96GX1 697 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 NBPF4Q96M43 638 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 ALPK1Q96QP1 1244 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 HAUS7Q99871 368 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 HIRIP3Q9BW71 556 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 ADGRE2Q9UHX3 823 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 DIS3Q9Y2L1 958 aaKnown RBP6.06□□□□□ -1.44
HDAC9-209ENST00000425071 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
HDAC9-209ENST00000425071 SSU72P8A0A1W2PR75 194 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 ANKRD34BA5PLL1 514 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 SHOXO15266 292 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 PPM1BO75688 479 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 BMP8BP34820 402 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 GDNFP39905 211 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 SNW1Q13573 536 aaKnown RBP6.05□□□□□ -1.44
HDAC9-209ENST00000425071 SOGA3Q5TF21 947 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 TDRD10Q5VZ19 366 aaKnown RBP6.05□□□□□ -1.44
HDAC9-209ENST00000425071 DCAF15Q66K64 600 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 CWF19L1Q69YN2 538 aaKnown RBP6.05□□□□□ -1.44
HDAC9-209ENST00000425071 KIAA1211LQ6NV74 962 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 CKAP2LQ8IYA6 745 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 USHBP1Q8N6Y0 703 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 DSCC1Q9BVC3 393 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 MBNL3Q9NUK0 354 aaKnown RBP6.05□□□□□ -1.44
HDAC9-209ENST00000425071 GFOD1Q9NXC2 390 aa6.05□□□□□ -1.44
HDAC9-209ENST00000425071 SF3B6Q9Y3B4 125 aaKnown RBP6.05□□□□□ -1.44
HDAC9-209ENST00000425071 RNASE1P07998 156 aaKnown RBP6.04□□□□□ -1.44
HDAC9-209ENST00000425071 JUNBP17275 347 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-209ENST00000425071 NOP2P46087 812 aaKnown RBP6.04□□□□□ -1.44
HDAC9-209ENST00000425071 ZNF445P59923 1031 aa6.04□□□□□ -1.44
HDAC9-209ENST00000425071 RBM10P98175 930 aaKnown RBP6.04□□□□□ -1.44
HDAC9-209ENST00000425071 DUSP4Q13115 394 aa6.04□□□□□ -1.44
HDAC9-209ENST00000425071 ANKS3Q6ZW76 656 aa6.04□□□□□ -1.44
HDAC9-209ENST00000425071 ATG4DQ86TL0 474 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-209ENST00000425071 RCC1LQ96I51 464 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms