RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 USP38Q8NB14 1042 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 ATXN2LQ8WWM7 1075 aaKnown RBP18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 XPNPEP3Q9NQH7 507 aa18.84■□□□□ 0.61
RPUSD3-204ENST00000424438 HSP90AB4PQ58FF6 505 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 KIAA1755Q5JYT7 1200 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 ANO1Q5XXA6 986 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 NCAPG2Q86XI2 1143 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 SIAH1Q8IUQ4 282 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 ATG4CQ96DT6 458 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 TINF2Q9BSI4 451 aa18.83■□□□□ 0.6
RPUSD3-204ENST00000424438 TCRBV5S4A2TA0A5A2 114 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 ICA1Q05084 483 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 GRIN2CQ14957 1233 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 TMEM132BQ14DG7 1078 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF792Q3KQV3 632 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 PRAMEF19Q5SWL8 479 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 SLC9C2Q5TAH2 1124 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 ATP8A2Q9NTI2 1148 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 MYO9BQ13459 2157 aa18.82■□□□□ 0.6
RPUSD3-204ENST00000424438 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 A0A1W2PQ45 241 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 A0A1W2PQY0 241 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 AKR1A1P14550 325 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 ITGB8P26012 769 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 FPGSQ05932 587 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 AACSQ86V21 672 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 ADAMTS19Q8TE59 1207 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 FERMT2Q96AC1 680 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 GAS2L1Q99501 681 aaPredicted RBP18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 THEGQ9P2T0 379 aa18.81■□□□□ 0.6
RPUSD3-204ENST00000424438 BAZ2AQ9UIF9 1905 aaKnown RBP18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 MOXD2PA6NHM9 499 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 ADAMTS4O75173 837 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF865P0CJ78 1059 aaPredicted RBP18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 RAG1P15918 1043 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 DNAJB2P25686 324 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 PLS1Q14651 629 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 PPM1EQ8WY54 764 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 ASB2Q96Q27 587 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 UHRF1Q96T88 793 aaPredicted RBP18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 MMP19Q99542 508 aa18.8■□□□□ 0.6
RPUSD3-204ENST00000424438 SYNGAP1Q96PV0 1343 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF532Q9HCE3 1301 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 GREB1LQ9C091 1923 aaPredicted RBP18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 EPHB4P54760 987 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 KCTD2Q14681 263 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 C1QTNF1Q9BXJ1 281 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 C1orf115Q9H7X2 142 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF214Q9UL59 606 aaPredicted RBP18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 PPP1R9AQ9ULJ8 1098 aa18.79■□□□□ 0.6
RPUSD3-204ENST00000424438 MROH7Q68CQ1 1323 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 BDP1A6H8Y1 2624 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 DCDC2CA8MYV0 355 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 VWA5AO00534 786 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 AKR1B1P15121 316 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 STAT3P40763 770 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 MRPS5P82675 430 aaKnown RBP18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 MAMDC4Q6UXC1 1216 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 SLC44A5Q8NCS7 719 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 REPS2Q8NFH8 660 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 CNPY2Q9Y2B0 182 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 MYH7P12883 1935 aa18.78■□□□□ 0.6
RPUSD3-204ENST00000424438 ELP1O95163 1332 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 PGK1P00558 417 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 EVX2Q03828 476 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 FAAP100Q0VG06 881 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 C12orf60Q5U649 245 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 CCDC174Q6PII3 467 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 C16orf86Q6ZW13 317 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 ZNF467Q7Z7K2 595 aaPredicted RBP18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 SPICE1Q8N0Z3 855 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 TBX21Q9UL17 535 aa18.77■□□□□ 0.6
RPUSD3-204ENST00000424438 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 TIMP1P01033 207 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 CYP2D6P10635 497 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 CDK8P49336 464 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 ACLYP53396 1101 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 RASIP1Q5U651 963 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 AMOTL1Q8IY63 956 aa18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 CLASRPQ8N2M8 674 aaKnown RBP18.76■□□□□ 0.59
RPUSD3-204ENST00000424438 TIFAQ96CG3 184 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms