RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 TMEM39AQ9NV64 488 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 PPP1R1BQ9UD71 204 aaPredicted RBP8.02□□□□□ -1.13
LINC00458-201ENST00000423442 SPATA31E1Q6ZUB1 1445 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 CAMTA1Q9Y6Y1 1673 aa8.02□□□□□ -1.13
LINC00458-201ENST00000423442 SBNO1A3KN83 1393 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 FARP2O94887 1054 aaPredicted RBP8.01□□□□□ -1.13
LINC00458-201ENST00000423442 ITIH2P19823 946 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 ERICH6Q7L0X2 663 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 CSRNP1Q96S65 589 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 MKNK2Q9HBH9 465 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 SSU72Q9NP77 194 aaKnown RBP8.01□□□□□ -1.13
LINC00458-201ENST00000423442 USTQ9Y2C2 406 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 TECPR2O15040 1411 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 THSD7AQ9UPZ6 1657 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 ADGRB2O60241 1585 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 SPATA31A5Q5VU36 1347 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 SPATA31A7Q8IWB4 1347 aa8.01□□□□□ -1.13
LINC00458-201ENST00000423442 NUP188Q5SRE5 1749 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 ABCC11Q96J66 1382 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 COL14A1Q05707 1796 aaKnown RBP8□□□□□ -1.13
LINC00458-201ENST00000423442 RREB1Q92766 1687 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 DBX1A6NMT0 343 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 KCNQ2O43526 872 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 PPP2R3AQ06190 1150 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 FAM196AQ6ZSG2 479 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
LINC00458-201ENST00000423442 HEXIM2Q96MH2 286 aaKnown RBP8□□□□□ -1.13
LINC00458-201ENST00000423442 SPON1Q9HCB6 807 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 PRDM7Q9NQW5 492 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 KNDC1Q76NI1 1749 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 IFT172Q9UG01 1749 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 NRXN1Q9ULB1 1477 aa8□□□□□ -1.13
LINC00458-201ENST00000423442 PARD3Q8TEW0 1356 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 TMEM265A0A087WTH1 108 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 SAFB2Q14151 953 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC00458-201ENST00000423442 NBPF8Q3BBV2 869 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 FBLN7Q53RD9 439 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
LINC00458-201ENST00000423442 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 TMEM40Q8WWA1 233 aa7.99□□□□□ -1.13
LINC00458-201ENST00000423442 NINLQ9Y2I6 1382 aa7.98□□□□□ -1.13
LINC00458-201ENST00000423442 YTHDC2Q9H6S0 1430 aaKnown RBP7.98□□□□□ -1.13
LINC00458-201ENST00000423442 ANGEL2Q5VTE6 544 aaKnown RBP7.98□□□□□ -1.13
LINC00458-201ENST00000423442 MAP1SQ66K74 1059 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-201ENST00000423442 PRAM1Q96QH2 718 aa7.98□□□□□ -1.13
LINC00458-201ENST00000423442 PIK3C2GO75747 1445 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00458-201ENST00000423442 MPRIPQ6WCQ1 1025 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 RNF214Q8ND24 703 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 GPBAR1Q8TDU6 330 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 BCO2Q9BYV7 579 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 TNKS2Q9H2K2 1166 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 TRPM3Q9HCF6 1732 aaPredicted RBP7.97□□□□□ -1.13
LINC00458-201ENST00000423442 SPATA31A1Q5TZJ5 1347 aa7.97□□□□□ -1.13
LINC00458-201ENST00000423442 ALS2Q96Q42 1657 aa7.96□□□□□ -1.13
LINC00458-201ENST00000423442 ARNTP27540 789 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 C1QTNF8P60827 252 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 ERVK-24P63145 666 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 PKN1Q16512 942 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 SLC23A3Q6PIS1 610 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 SPOCD1Q6ZMY3 1216 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 NLRP2Q9NX02 1062 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00458-201ENST00000423442 AKAP2Q9Y2D5 859 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 CSADQ9Y600 493 aa7.96□□□□□ -1.14
LINC00458-201ENST00000423442 CRYBG1Q9Y4K1 1723 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 MESP2Q0VG99 397 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 PPM1JQ5JR12 505 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 HOMEZQ8IX15 550 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 ALKBH8Q96BT7 664 aaKnown RBP7.95□□□□□ -1.14
LINC00458-201ENST00000423442 DMRTB1Q96MA1 342 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 SIN3AQ96ST3 1273 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 PRDM11Q9NQV5 511 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 PPP4R2Q9NY27 417 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
LINC00458-201ENST00000423442 NRKQ7Z2Y5 1582 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 CHRNA2Q15822 529 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 FLAD1Q8NFF5 587 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
LINC00458-201ENST00000423442 RBCK1Q9BYM8 510 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 CBX8Q9HC52 389 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 SNX11Q9Y5W9 270 aa7.94□□□□□ -1.14
LINC00458-201ENST00000423442 LRRC10BA6NIK2 292 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 XRCC5P13010 732 aaKnown RBP7.93□□□□□ -1.14
LINC00458-201ENST00000423442 NME2P22392 152 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 NTF4P34130 210 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 IKZF1Q13422 519 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 SPACA3Q8IXA5 215 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 NGDNQ8NEJ9 315 aaKnown RBP7.93□□□□□ -1.14
LINC00458-201ENST00000423442 ACSBG1Q96GR2 724 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 SLC38A3Q99624 504 aa7.93□□□□□ -1.14
LINC00458-201ENST00000423442 PDGFDQ9GZP0 370 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms