RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CCDC57Q2TAC2 916 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PPP1R2P3Q6NXS1 205 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 TMEM139Q8IV31 216 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 TC2NQ8N9U0 490 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 SEC16BQ96JE7 1060 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ZIM3Q96PE6 472 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 INCENPQ9NQS7 918 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 WDR35Q9P2L0 1181 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 INTUQ9ULD6 942 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 CEP104O60308 925 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PNOCQ13519 176 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 GPR162Q16538 588 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 FAM117BQ6P1L5 589 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 C1orf228Q6PIY5 440 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 VSTM4Q8IW00 320 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 C8orf58Q8NAV2 365 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 MDM1Q8TC05 714 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 HPS3Q969F9 1004 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 CLMNQ96JQ2 1002 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 DDX23Q9BUQ8 820 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 EBF2Q9HAK2 575 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 KCND1Q9NSA2 647 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ETNK2Q9NVF9 386 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 FAM184BQ9ULE4 1060 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ZNF510Q9Y2H8 683 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 TMEM98Q9Y2Y6 226 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 RBMX2Q9Y388 322 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 SBNO1A3KN83 1393 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 MACROD2A1Z1Q3 448 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 MAGEA13PA6NCF6 341 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 H7C1W4 665 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 IKBKBO14920 756 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 SPTLC1O15269 473 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 TEX33O43247 280 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 MGRN1O60291 552 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ATP1A1P05023 1023 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 PDCP20941 246 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 KCTD21Q4G0X4 260 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 MRPL50Q8N5N7 158 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC155Q8N6L0 562 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD24Q8TF21 1146 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
CNOT4-205ENST00000423368 AASDHPPTQ9NRN7 309 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 ADGRG1Q9Y653 693 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC141Q6ZP82 1450 aa7.6□□□□□ -1.19
CNOT4-205ENST00000423368 IGF1RP08069 1367 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 A0A1W2PQ67 120 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 GOLGA6L9A6NEM1 432 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 RAPGEF3O95398 923 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 GSTT1P30711 240 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 KLC1Q07866 573 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 NCAPHQ15003 741 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 STK38Q15208 465 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CFAP58Q5T655 872 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 SPTY2D1Q68D10 685 aaPredicted RBP7.59□□□□□ -1.19
CNOT4-205ENST00000423368 ANO7Q6IWH7 933 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 KRT27Q7Z3Y8 459 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 PPFIBP1Q86W92 1011 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 LRRC1Q9BTT6 524 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CABP2Q9NPB3 220 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 GJB4Q9NTQ9 266 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 PAG1Q9NWQ8 432 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 EFR3BQ9Y2G0 817 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 KIAA0586Q9BVV6 1533 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 GOLGA6L10A0A0M3HER8 536 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 FAM107AO95990 144 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 VCAM1P19320 739 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 IFNAR2P48551 515 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 TRIM29Q14134 588 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 SETDB1Q15047 1291 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CCNI2Q6ZMN8 369 aaPredicted RBP7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC80Q76M96 950 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 RIC3Q7Z5B4 369 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CCDC65Q8IXS2 484 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 DYDC2Q96IM9 177 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
CNOT4-205ENST00000423368 INTS13Q9NVM9 706 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 CTDP1Q9Y5B0 961 aaPredicted RBP7.59□□□□□ -1.19
CNOT4-205ENST00000423368 SLC4A7Q9Y6M7 1214 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 HECW1Q76N89 1606 aa7.59□□□□□ -1.19
CNOT4-205ENST00000423368 FYCO1Q9BQS8 1478 aa7.59□□□□□ -1.2
CNOT4-205ENST00000423368 AKR1B10O60218 316 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 VAMP4O75379 141 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 UBTFL6P0CB48 400 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ATP2A2P16615 1042 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ALDH5A1P51649 535 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 PSMD7P51665 324 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 BEND3Q5T5X7 828 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 ACTR5Q9H9F9 607 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-205ENST00000423368 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 A6NHS1 94 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 GOLGA8KD6RF30 607 aa7.58□□□□□ -1.2
CNOT4-205ENST00000423368 STX10O60499 249 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms