RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 RABGAP1Q9Y3P9 1069 aa9.26□□□□□ -0.93
HLA-DQA1-204ENST00000422863 IVNS1ABPQ9Y6Y0 642 aa9.26□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L15C9J2P7 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L13C9JLJ4 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L11C9JVI0 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L18D6R9N7 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 CIAO1O76071 339 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 LDHCP07864 332 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 CLTBP09497 229 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 CCNA1P78396 465 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 MRPS5P82675 430 aaKnown RBP9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 GRB14Q14449 540 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SNX17Q15036 470 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 CATSPERGQ6ZRH7 1159 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 IL27Q8NEV9 243 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ZDHHC16Q969W1 377 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TMEM39AQ9NV64 488 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TACC3Q9Y6A5 838 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TRANK1O15050 2925 aa9.25□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PARP14Q460N5 1801 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 A0A1B0GUL7 405 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 GH2P01242 217 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 HOXC6P09630 235 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 GSTO1P78417 241 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 FPGSQ05932 587 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TFCP2Q12800 502 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 FAM47AQ5JRC9 791 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 GTF3C2Q8WUA4 911 aaPredicted RBP9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 FEZ1Q99689 392 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PBX4Q9BYU1 374 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 EPHX3Q9H6B9 360 aa9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PRRC2BQ5JSZ5 2229 aaKnown RBP9.24□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SEPT4O43236 478 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 COBLO75128 1261 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PGK1P00558 417 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 IGHA2P01877 340 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ADORA2AP29274 412 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 TFF2Q03403 129 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 FOXP4Q8IVH2 680 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SPATA5Q8NB90 893 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ACER1Q8TDN7 264 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 LRFN3Q9BTN0 628 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 LRP2BPQ9P2M1 347 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ZNF236Q9UL36 1845 aa9.23□□□□□ -0.93
HLA-DQA1-204ENST00000422863 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 UBTFL1P0CB47 393 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ACRP10323 421 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 VCAM1P19320 739 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 DYNLL1P63167 89 aaKnown RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 FAAP100Q0VG06 881 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 GORABQ5T7V8 394 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 C16orf59Q7L2K0 433 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ADGRA1Q86SQ6 560 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SLC44A5Q8NCS7 719 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 ZFRQ96KR1 1074 aaKnown RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 NOL10Q9BSC4 688 aaKnown RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 MOV10L1Q9BXT6 1211 aaKnown RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 DHX36Q9H2U1 1008 aaKnown RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 RPAP3Q9H6T3 665 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 PHF24Q9UPV7 400 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 V9GY48 417 aaPredicted RBP9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 MUC6Q6W4X9 2439 aa9.22□□□□□ -0.93
HLA-DQA1-204ENST00000422863 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MAP4K4O95819 1239 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 BMP1P13497 986 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TAL1P17542 331 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ERCC3P19447 782 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MCAMP43121 646 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 KCNQ1P51787 676 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 PLS1Q14651 629 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 MVPQ14764 893 aaKnown RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 TMEM240Q5SV17 173 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 AKNAD1Q5T1N1 836 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 OLFML2BQ68BL8 750 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 NAA16Q6N069 864 aaPredicted RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 METTL16Q86W50 562 aaKnown RBP9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 SSH1Q8WYL5 1049 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 C12orf42Q96LP6 360 aa9.21□□□□□ -0.94
HLA-DQA1-204ENST00000422863 C1QTNF1Q9BXJ1 281 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms