RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ZNF543Q08ER8 600 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 ZYXQ15942 572 aaKnown RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 DCAF15Q66K64 600 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 SCYL3Q8IZE3 742 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 PIBF1Q8WXW3 757 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 MAP3K14Q99558 947 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 SLC26A6Q9BXS9 759 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 UBA5Q9GZZ9 404 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 DOCK1Q14185 1865 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 PHIPQ8WWQ0 1821 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 CALM1P0DP23 149 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 CALM2P0DP24 149 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 CALM3P0DP25 149 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 SLC16A2P36021 539 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 GUCY1B3Q02153 619 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 LDHDQ86WU2 507 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 IFNLR1Q8IU57 520 aaPredicted RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 CTCFLQ8NI51 663 aaPredicted RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
HPS4-204ENST00000422379 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
HPS4-204ENST00000422379 DHX16O60231 1041 aaKnown RBP10.4□□□□□ -0.74
HPS4-204ENST00000422379 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
HPS4-204ENST00000422379 PARP1P09874 1014 aaKnown RBP10.4□□□□□ -0.74
HPS4-204ENST00000422379 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
HPS4-204ENST00000422379 SLFN13Q68D06 897 aa10.4□□□□□ -0.74
HPS4-204ENST00000422379 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
HPS4-204ENST00000422379 RBM28Q9NW13 759 aaKnown RBP10.4□□□□□ -0.74
HPS4-204ENST00000422379 WDR33Q9C0J8 1336 aaKnown RBP10.4□□□□□ -0.75
HPS4-204ENST00000422379 TCHHQ07283 1943 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 STX6O43752 255 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 RAD21O60216 631 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 TAL1P17542 331 aaPredicted RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 SPP2Q13103 211 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 STK36Q9NRP7 1315 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 CCDC196A0A1B0GTZ2 297 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 PPP1R11O60927 126 aaPredicted RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 KIF5BP33176 963 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 SNAP25P60880 206 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 MAP3K9P80192 1104 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 HMGN5P82970 282 aaKnown RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 SSRP1Q08945 709 aaKnown RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 MTMR2Q13614 643 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 CST9Q5W186 159 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 HOOK2Q96ED9 719 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 ALG1Q9BT22 464 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 RNF26Q9BY78 433 aaPredicted RBP10.39□□□□□ -0.75
HPS4-204ENST00000422379 VCPKMTQ9H867 229 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 ZHX2Q9Y6X8 837 aa10.39□□□□□ -0.75
HPS4-204ENST00000422379 VPS37CA5D8V6 355 aaPredicted RBP10.38□□□□□ -0.75
HPS4-204ENST00000422379 TRIM75PA6NK02 468 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 USP17L10C9JJH3 530 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 KIF3CO14782 793 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 PRPF3O43395 683 aaKnown RBP10.38□□□□□ -0.75
HPS4-204ENST00000422379 GJA5P36382 358 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 SLC1A4P43007 532 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 PPP2R5BQ15173 497 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 NPY5RQ15761 445 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 MAP3K11Q16584 847 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 CCDC96Q2M329 555 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 FAM83BQ5T0W9 1011 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 LDLRAD1Q5T700 205 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 FAM173BQ6P4H8 233 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 FERMT3Q86UX7 667 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 GPKOWQ92917 476 aaPredicted RBP eCLIP10.38□□□□□ -0.75
HPS4-204ENST00000422379 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 SPZ1Q9BXG8 430 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 KIAA1683Q9H0B3 1180 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 RIOX1Q9H6W3 641 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 JMJD4Q9H9V9 463 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 VAT1LQ9HCJ6 419 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 KCNJ14Q9UNX9 436 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 AFG3L2Q9Y4W6 797 aa10.38□□□□□ -0.75
HPS4-204ENST00000422379 CEP350Q5VT06 3117 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 KIF28PB7ZC32 967 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 CDKL5O76039 1030 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 ZSCAN22P10073 491 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 KLHL40Q2TBA0 621 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 ADGRF4Q8IZF3 695 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 FAM184AQ8NB25 1140 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 ZNF280CQ8ND82 737 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 FBXO18Q8NFZ0 1043 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 DCAF4Q8WV16 495 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 PIGSQ96S52 555 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 PICK1Q9NRD5 415 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms