RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 NUP88Q99567 741 aaPredicted RBP31.25■■■□□ 2.59
CDK9-202ENST00000421939 FBXO28Q9NVF7 368 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 GJD2Q9UKL4 321 aa31.25■■■□□ 2.59
CDK9-202ENST00000421939 PLXNB2O15031 1838 aa31.24■■■□□ 2.59
CDK9-202ENST00000421939 ZNF213O14771 459 aa31.24■■■□□ 2.59
CDK9-202ENST00000421939 PLEKHH3Q7Z736 793 aa31.24■■■□□ 2.59
CDK9-202ENST00000421939 RNF41Q9H4P4 317 aaPredicted RBP31.24■■■□□ 2.59
CDK9-202ENST00000421939 CWC22Q9HCG8 908 aaKnown RBP31.24■■■□□ 2.59
CDK9-202ENST00000421939 IL17RBQ9NRM6 502 aa31.24■■■□□ 2.59
CDK9-202ENST00000421939 KIAA0100Q14667 2235 aaKnown RBP31.24■■■□□ 2.59
CDK9-202ENST00000421939 MYCP01106 439 aaPredicted RBP31.23■■■□□ 2.59
CDK9-202ENST00000421939 ELNP15502 786 aa31.23■■■□□ 2.59
CDK9-202ENST00000421939 MFSD6Q6ZSS7 791 aa31.23■■■□□ 2.59
CDK9-202ENST00000421939 BIN2Q9UBW5 565 aaPredicted RBP31.23■■■□□ 2.59
CDK9-202ENST00000421939 PPP1R9AQ9ULJ8 1098 aa31.23■■■□□ 2.59
CDK9-202ENST00000421939 STX8Q9UNK0 236 aa31.23■■■□□ 2.59
CDK9-202ENST00000421939 NMT2O60551 498 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 SKAP1Q86WV1 359 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 NUDT12Q9BQG2 462 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 TMEM106CQ9BVX2 250 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 SPATC1LQ9H0A9 340 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 CTNNA3Q9UI47 895 aa31.22■■■□□ 2.59
CDK9-202ENST00000421939 POTEFA5A3E0 1075 aa31.21■■■□□ 2.59
CDK9-202ENST00000421939 UBXN2AP68543 259 aa31.21■■■□□ 2.59
CDK9-202ENST00000421939 WDR78Q5VTH9 848 aa31.21■■■□□ 2.59
CDK9-202ENST00000421939 IMMTQ16891 758 aaKnown RBP31.2■■■□□ 2.59
CDK9-202ENST00000421939 SLFN13Q68D06 897 aa31.2■■■□□ 2.59
CDK9-202ENST00000421939 SLF1Q9BQI6 1058 aa31.2■■■□□ 2.59
CDK9-202ENST00000421939 MOV10L1Q9BXT6 1211 aaKnown RBP31.2■■■□□ 2.59
CDK9-202ENST00000421939 ADAMTS5Q9UNA0 930 aa31.2■■■□□ 2.59
CDK9-202ENST00000421939 NEDD4P46934 1319 aa31.2■■■□□ 2.58
CDK9-202ENST00000421939 INHAP05111 366 aa31.19■■■□□ 2.58
CDK9-202ENST00000421939 NOVP48745 357 aa31.19■■■□□ 2.58
CDK9-202ENST00000421939 MTFR1Q15390 333 aa31.19■■■□□ 2.58
CDK9-202ENST00000421939 MORN1Q5T089 497 aa31.19■■■□□ 2.58
CDK9-202ENST00000421939 VWA5AO00534 786 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 MLLT1Q03111 559 aaPredicted RBP31.18■■■□□ 2.58
CDK9-202ENST00000421939 PLS1Q14651 629 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 TMEM132BQ14DG7 1078 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 SHCBP1Q8NEM2 672 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 USP6NLQ92738 828 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 TCP11L1Q9NUJ3 509 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 IVNS1ABPQ9Y6Y0 642 aa31.18■■■□□ 2.58
CDK9-202ENST00000421939 COL11A1P12107 1806 aaPredicted RBP31.17■■■□□ 2.58
CDK9-202ENST00000421939 SGSM2O43147 1006 aa31.17■■■□□ 2.58
CDK9-202ENST00000421939 CENPBP07199 599 aaPredicted RBP31.17■■■□□ 2.58
CDK9-202ENST00000421939 CYP2B6P20813 491 aa31.17■■■□□ 2.58
CDK9-202ENST00000421939 ESR2Q92731 530 aa31.17■■■□□ 2.58
CDK9-202ENST00000421939 GMCL1Q96IK5 515 aa31.17■■■□□ 2.58
CDK9-202ENST00000421939 BMP3P12645 472 aa31.16■■■□□ 2.58
CDK9-202ENST00000421939 XRCC5P13010 732 aaKnown RBP31.16■■■□□ 2.58
CDK9-202ENST00000421939 PTPREP23469 700 aa31.16■■■□□ 2.58
CDK9-202ENST00000421939 RGS2P41220 211 aa31.16■■■□□ 2.58
CDK9-202ENST00000421939 NT5C2P49902 561 aa31.16■■■□□ 2.58
CDK9-202ENST00000421939 BMP2KLQ5H9B9 411 aa31.16■■■□□ 2.58
CDK9-202ENST00000421939 SLC15A5A6NIM6 579 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 HMGCRP04035 888 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 CCL5P13501 91 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 ERCC3P19447 782 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 REPS2Q8NFH8 660 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 APBA2Q99767 749 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 FEM1BQ9UK73 627 aa31.15■■■□□ 2.58
CDK9-202ENST00000421939 SLC1A4P43007 532 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 MAP2K5Q13163 448 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 GRB14Q14449 540 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 PRPF38AQ8NAV1 312 aaKnown RBP31.14■■■□□ 2.58
CDK9-202ENST00000421939 NKX2-3Q8TAU0 364 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 MROH8Q9H579 483 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 ISY1Q9ULR0 285 aaKnown RBP31.14■■■□□ 2.58
CDK9-202ENST00000421939 ZNF236Q9UL36 1845 aa31.14■■■□□ 2.58
CDK9-202ENST00000421939 PTH1RQ03431 593 aa31.13■■■□□ 2.57
CDK9-202ENST00000421939 NCAPG2Q86XI2 1143 aa31.13■■■□□ 2.57
CDK9-202ENST00000421939 TRIB2Q92519 343 aa31.13■■■□□ 2.57
CDK9-202ENST00000421939 ZNF214Q9UL59 606 aaPredicted RBP31.13■■■□□ 2.57
CDK9-202ENST00000421939 SLC25A27O95847 323 aa31.12■■■□□ 2.57
CDK9-202ENST00000421939 TOP1P11387 765 aaKnown RBP31.12■■■□□ 2.57
CDK9-202ENST00000421939 ZKSCAN1P17029 563 aaPredicted RBP31.12■■■□□ 2.57
CDK9-202ENST00000421939 EN2P19622 333 aaPredicted RBP31.12■■■□□ 2.57
CDK9-202ENST00000421939 MCCP23508 829 aa31.12■■■□□ 2.57
CDK9-202ENST00000421939 TRMT44Q8IYL2 757 aaKnown RBP31.12■■■□□ 2.57
CDK9-202ENST00000421939 KIFC2Q96AC6 838 aa31.12■■■□□ 2.57
CDK9-202ENST00000421939 RNF208Q9H0X6 261 aa31.12■■■□□ 2.57
CDK9-202ENST00000421939 UNC93B1Q9H1C4 597 aa31.12■■■□□ 2.57
CDK9-202ENST00000421939 B4E1Z4 1266 aa31.11■■■□□ 2.57
CDK9-202ENST00000421939 KDM4AO75164 1064 aa31.11■■■□□ 2.57
CDK9-202ENST00000421939 RIOX2Q8IUF8 465 aa31.11■■■□□ 2.57
CDK9-202ENST00000421939 CHMP4CQ96CF2 233 aa31.11■■■□□ 2.57
CDK9-202ENST00000421939 TMEM47Q9BQJ4 181 aa31.11■■■□□ 2.57
CDK9-202ENST00000421939 U3KPZ7 1027 aaPredicted RBP31.11■■■□□ 2.57
CDK9-202ENST00000421939 TNRC18O15417 2968 aaPredicted RBP31.1■■■□□ 2.57
CDK9-202ENST00000421939 TMEM232C9JQI7 657 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 STRNO43815 780 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 STAT3P40763 770 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 STAT2P52630 851 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 RCSD1Q6JBY9 416 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 RASGRP2Q7LDG7 609 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 TTC14Q96N46 770 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 TEX13BQ9BXU2 312 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 CNNM2Q9H8M5 875 aa31.1■■■□□ 2.57
CDK9-202ENST00000421939 MTMR7Q9Y216 660 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms