RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 PRPF6O94906 941 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 ZMYM1Q5SVZ6 1142 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 UTP14CQ5TAP6 766 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 ZNRF3Q9ULT6 936 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 H7C1W4 665 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 M0R2C6 588 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 SCG2P13521 617 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 HSPA4P34932 840 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 TM6SF1Q9BZW5 370 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 CD2APQ9Y5K6 639 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 EEF2P13639 858 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 YARSP54577 528 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 FAM102BQ5T8I3 360 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 JPH2Q9BR39 696 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 CD209Q9NNX6 404 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 HOXC10Q9NYD6 342 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
PTCH1-206ENST00000421141 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 LMBR1Q8WVP7 490 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 NRBP2Q9NSY0 501 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
PTCH1-206ENST00000421141 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 JADE2Q9NQC1 790 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 FASTKD5Q7L8L6 764 aaKnown RBP11.98□□□□□ -0.49
PTCH1-206ENST00000421141 TSNARE1Q96NA8 513 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-206ENST00000421141 ZBTB24O43167 697 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-206ENST00000421141 GAS8O95995 478 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 RASGRF1Q13972 1273 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 NEK8Q86SG6 692 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 MTFR1LQ9H019 292 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 EP400NLQ6ZTU2 488 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 GTF3C6Q969F1 213 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 GBP3Q9H0R5 595 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 GPSM2P81274 684 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 SLC15A2Q16348 729 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
PTCH1-206ENST00000421141 GOLGA8HP0CJ92 632 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 HERC4Q5GLZ8 1057 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-206ENST00000421141 RNF169Q8NCN4 708 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 RNF34Q969K3 372 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
PTCH1-206ENST00000421141 RPS6KC1Q96S38 1066 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 MST1RQ04912 1400 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 MYZAPP0CAP1 466 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF771Q7L3S4 317 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-206ENST00000421141 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-206ENST00000421141 KCNJ14Q9UNX9 436 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 SASH1O94885 1247 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 HSP90AA4PQ58FG1 418 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 SLC17A8Q8NDX2 589 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 UIMC1Q96RL1 719 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 CTNND2Q9UQB3 1225 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 AKT3Q9Y243 479 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 CETN3O15182 167 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 KRT19P08727 400 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 YWHAEP62258 255 aaKnown RBP11.97□□□□□ -0.49
PTCH1-206ENST00000421141 KIAA0753Q2KHM9 967 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 IKBKGQ9Y6K9 419 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 PNPLA6Q8IY17 1366 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 SORBS3O60504 671 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 TFDP1Q14186 410 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 C8orf34Q49A92 452 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 XKR9Q5GH70 373 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 LRCH2Q5VUJ6 765 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
PTCH1-206ENST00000421141 A0A1B0GVL5 298 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 FAM193AP78312 1265 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-206ENST00000421141 ATF7P17544 494 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-206ENST00000421141 SYT1P21579 422 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 CABP7Q86V35 215 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 ABCD1P33897 745 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 CDK8P49336 464 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 IFFO1Q0D2I5 559 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 UVSSAQ2YD98 709 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 TAF3Q5VWG9 929 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 GOLGA5Q8TBA6 731 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 SEPT9Q9UHD8 586 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-206ENST00000421141 ADCY5O95622 1261 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 AOPEPQ8N6M6 819 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 ZNF577Q9BSK1 485 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
PTCH1-206ENST00000421141 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.5
PTCH1-206ENST00000421141 IGBP1P78318 339 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms