RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 PPP2R5EQ16537 467 aa13.6□□□□□ -0.23
CLCN4-203ENST00000421085 PPP4R1Q8TF05 950 aa13.6□□□□□ -0.23
CLCN4-203ENST00000421085 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
CLCN4-203ENST00000421085 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
CLCN4-203ENST00000421085 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
CLCN4-203ENST00000421085 PARD6BQ9BYG5 372 aa13.6□□□□□ -0.23
CLCN4-203ENST00000421085 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
CLCN4-203ENST00000421085 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PFKFB2O60825 505 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 ADCY7P51828 1080 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
CLCN4-203ENST00000421085 H7C1D1 291 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PHBP35232 272 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 NPATQ14207 1427 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 SERPINB6P35237 376 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 GRK7Q8WTQ7 553 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 IFNB1P01574 187 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 LRRC43Q8N309 656 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 PLCH2O75038 1416 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
CLCN4-203ENST00000421085 CMTR1Q8N1G2 835 aaKnown RBP13.59□□□□□ -0.23
CLCN4-203ENST00000421085 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
CLCN4-203ENST00000421085 STRN3Q13033 797 aa13.58□□□□□ -0.23
CLCN4-203ENST00000421085 C11orf57Q6ZUT1 292 aaPredicted RBP13.58□□□□□ -0.23
CLCN4-203ENST00000421085 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.23
CLCN4-203ENST00000421085 RDH13Q8NBN7 331 aa13.58□□□□□ -0.23
CLCN4-203ENST00000421085 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.23
CLCN4-203ENST00000421085 LRRC8CQ8TDW0 803 aa13.58□□□□□ -0.23
CLCN4-203ENST00000421085 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.23
CLCN4-203ENST00000421085 CHL1O00533 1208 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 EHHADHQ08426 723 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 COL17A1Q9UMD9 1497 aaPredicted RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 EPHB4P54760 987 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 RNF34Q969K3 372 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 SUDS3Q9H7L9 328 aaPredicted RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 KDM5BQ9UGL1 1544 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 A0A0D9SFI3 127 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 PRR16Q569H4 304 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 FBXO38Q6PIJ6 1188 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 HAUS7Q99871 368 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 ABCC1P33527 1531 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 CD2BP2O95400 341 aaKnown RBP13.58□□□□□ -0.24
CLCN4-203ENST00000421085 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 NYXQ9GZU5 481 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
CLCN4-203ENST00000421085 ZAP70P43403 619 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 RASSF7Q02833 373 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 RBL2Q08999 1139 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 PPP2R5AQ15172 486 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 NXNQ6DKJ4 435 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 DBN1Q16643 649 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 GPATCH8Q9UKJ3 1502 aaKnown RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 TERF2Q15554 542 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 FAM133BQ5BKY9 247 aaKnown RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 BSPRYQ5W0U4 402 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 MYOCDQ8IZQ8 938 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 COBLO75128 1261 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 C2orf54Q08AI8 447 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 GABPB2Q8TAK5 448 aaPredicted RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
CLCN4-203ENST00000421085 IL13P35225 146 aa13.57□□□□□ -0.24
CLCN4-203ENST00000421085 SLC8A3P57103 927 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 CCDC151A5D8V7 595 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 RPN1P04843 607 aaKnown RBP13.56□□□□□ -0.24
CLCN4-203ENST00000421085 DPCR1Q3MIW9 517 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 AATFQ9NY61 560 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLCN4-203ENST00000421085 RIMBP2O15034 1052 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 ATP5JP18859 108 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 STMN1P16949 149 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 CA8P35219 290 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 GLT8D2Q9H1C3 349 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 RAB20Q9NX57 234 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 IBTKQ9P2D0 1353 aaPredicted RBP13.56□□□□□ -0.24
CLCN4-203ENST00000421085 A0A087WWV3 80 aa13.56□□□□□ -0.24
CLCN4-203ENST00000421085 PNMA6AP0CW24 399 aaPredicted RBP13.56□□□□□ -0.24
CLCN4-203ENST00000421085 ATF2P15336 505 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms