RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 AMNQ9BXJ7 453 aa8.47□□□□□ -1.05
BDNF-209ENST00000420794 DDX19AQ9NUU7 478 aaKnown RBP8.47□□□□□ -1.05
BDNF-209ENST00000420794 FZD9O00144 591 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 PTMAP06454 111 aaKnown RBP8.46□□□□□ -1.05
BDNF-209ENST00000420794 PABPC4Q13310 644 aaKnown RBP eCLIP8.46□□□□□ -1.05
BDNF-209ENST00000420794 NONOQ15233 471 aaKnown RBP eCLIP8.46□□□□□ -1.05
BDNF-209ENST00000420794 ANO1Q5XXA6 986 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 FAM173BQ6P4H8 233 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 PIK3AP1Q6ZUJ8 805 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.05
BDNF-209ENST00000420794 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.05
BDNF-209ENST00000420794 ZBTB21Q9ULJ3 1066 aa8.46□□□□□ -1.05
BDNF-209ENST00000420794 GOLGA6L19H0YKK7 550 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 FLOT1O75955 427 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 EPHX2P34913 555 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 TROAPQ12815 778 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 PLS1Q14651 629 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 CCDC39Q9UFE4 941 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 PCDHA1Q9Y5I3 950 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 GOLGA6L6A8MZA4 724 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 BTBD18B2RXH4 712 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 USP17L10C9JJH3 530 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 CTNND1O60716 968 aaKnown RBP8.46□□□□□ -1.06
BDNF-209ENST00000420794 FGRP09769 529 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 EPS15P42566 896 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 IRX3P78415 501 aaPredicted RBP8.46□□□□□ -1.06
BDNF-209ENST00000420794 SYDE2Q5VT97 1194 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 CPXCR1Q8N123 301 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 GPKOWQ92917 476 aaPredicted RBP eCLIP8.46□□□□□ -1.06
BDNF-209ENST00000420794 PIGSQ96S52 555 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 MPHOSPH6Q99547 160 aaKnown RBP8.46□□□□□ -1.06
BDNF-209ENST00000420794 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 SH3GLB2Q9NR46 395 aa8.46□□□□□ -1.06
BDNF-209ENST00000420794 LAMB2P55268 1798 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 MMP1P03956 469 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 SHMT1P34896 483 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 SLC16A2P36021 539 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 USH1GQ495M9 461 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 CCDC183Q5T5S1 534 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 NAT10Q9H0A0 1025 aaKnown RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 PSTPIP2Q9H939 334 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 MRPL11Q9Y3B7 192 aaKnown RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 PCDHAC2Q9Y5I4 1007 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 ZHX2Q9Y6X8 837 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 CTAGE5O15320 804 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 YEATS4O95619 227 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 MARCKSP29966 332 aaPredicted RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 CAP2P40123 477 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 UBA7P41226 1012 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 JAKMIP3Q5VZ66 844 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 ZFPM1Q8IX07 1006 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 MRPS27Q92552 414 aaKnown RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 SPZ1Q9BXG8 430 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 B4DLN1 442 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 CCDC192P0DO97 292 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 ZNF280AP59817 542 aaPredicted RBP8.45□□□□□ -1.06
BDNF-209ENST00000420794 ANKS1AQ92625 1134 aa8.45□□□□□ -1.06
BDNF-209ENST00000420794 SMARCA1P28370 1054 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 MCM7P33993 719 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 SPP2Q13103 211 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 LETM2Q2VYF4 491 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 TTC38Q5R3I4 469 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 USP50Q70EL3 339 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 FAM177A1Q8N128 213 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 KRI1Q8N9T8 703 aaKnown RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 LEO1Q8WVC0 666 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 PCDHA4Q9UN74 947 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 PDHBP11177 359 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 KIF23Q02241 960 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 SRBD1Q8N5C6 995 aaKnown RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 C2orf69Q8N8R5 385 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 LPAR1Q92633 364 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 MKRN1Q9UHC7 482 aaKnown RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 SCAF8Q9UPN6 1271 aaKnown RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 ZNF541Q9H0D2 1346 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 ZBTB5O15062 677 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 ZNF174Q15697 407 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 TPD52L1Q16890 204 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 GADL1Q6ZQY3 521 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 GMLQ99445 158 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 FEM1BQ9UK73 627 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
BDNF-209ENST00000420794 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 ROBO3Q96MS0 1386 aa8.44□□□□□ -1.06
BDNF-209ENST00000420794 TAF1P21675 1872 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms