RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ADD2P35612 726 aa15.57■□□□□ 0.08
LINC00339-203ENST00000420503 IRX5P78411 483 aaPredicted RBP15.57■□□□□ 0.08
LINC00339-203ENST00000420503 TLE2Q04725 743 aa15.57■□□□□ 0.08
LINC00339-203ENST00000420503 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
LINC00339-203ENST00000420503 TMX2Q9Y320 296 aa15.57■□□□□ 0.08
LINC00339-203ENST00000420503 MYH7P12883 1935 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 USP17L12C9JPN9 530 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 USP17L21D6R901 530 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 EEF2P13639 858 aaKnown RBP15.56■□□□□ 0.08
LINC00339-203ENST00000420503 CDK8P49336 464 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 TTF1Q15361 905 aaPredicted RBP15.56■□□□□ 0.08
LINC00339-203ENST00000420503 ZNF697Q5TEC3 545 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
LINC00339-203ENST00000420503 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 ARRDC4Q8NCT1 418 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 MYLIPQ8WY64 445 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC00339-203ENST00000420503 PRKAG2Q9UGJ0 569 aa15.56■□□□□ 0.08
LINC00339-203ENST00000420503 TTC28Q96AY4 2481 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 STRNO43815 780 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 C12orf60Q5U649 245 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 REPS2Q8NFH8 660 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 SEMA6BQ9H3T3 888 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 MROH8Q9H579 483 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 PAG1Q9NWQ8 432 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 MCM3APO60318 1980 aa15.55■□□□□ 0.08
LINC00339-203ENST00000420503 GREB1LQ9C091 1923 aaPredicted RBP15.55■□□□□ 0.08
LINC00339-203ENST00000420503 RAD21O60216 631 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 IFIT2P09913 472 aaKnown RBP15.54■□□□□ 0.08
LINC00339-203ENST00000420503 MIER1Q8N108 512 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
LINC00339-203ENST00000420503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.54■□□□□ 0.08
LINC00339-203ENST00000420503 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 MMP19Q99542 508 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 PUS7LQ9H0K6 701 aaKnown RBP15.54■□□□□ 0.08
LINC00339-203ENST00000420503 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 SWAP70Q9UH65 585 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 ADAMTS5Q9UNA0 930 aa15.54■□□□□ 0.08
LINC00339-203ENST00000420503 MYADML2A6NDP7 307 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 WDR46O15213 610 aaKnown RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 SMARCA5O60264 1052 aaPredicted RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 PQBP1O60828 265 aaKnown RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 ZNF865P0CJ78 1059 aaPredicted RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 FCER1AP12319 257 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 ZNF792Q3KQV3 632 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 CTR9Q6PD62 1173 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 C16orf86Q6ZW13 317 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 ZNF214Q9UL59 606 aaPredicted RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 PHF24Q9UPV7 400 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
LINC00339-203ENST00000420503 SPTBN5Q9NRC6 3674 aaKnown RBP15.53■□□□□ 0.08
LINC00339-203ENST00000420503 MYO9BQ13459 2157 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 ZBED9Q6R2W3 1325 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 VWA5AO00534 786 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 ADCY6O43306 1168 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.08
LINC00339-203ENST00000420503 RIOX2Q8IUF8 465 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
LINC00339-203ENST00000420503 TINF2Q9BSI4 451 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
LINC00339-203ENST00000420503 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
LINC00339-203ENST00000420503 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 ADAMTS4O75173 837 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 STAT3P40763 770 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 TSHZ3Q63HK5 1081 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 HAUS7Q99871 368 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
LINC00339-203ENST00000420503 SNAI1O95863 264 aaPredicted RBP15.5■□□□□ 0.07
LINC00339-203ENST00000420503 CLTBP09497 229 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 RARBP10826 455 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 ATP5JP18859 108 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 PTGS1P23219 599 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 SLC4A3P48751 1232 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 FGD4Q96M96 766 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 ATP8A2Q9NTI2 1148 aa15.5■□□□□ 0.07
LINC00339-203ENST00000420503 SYNRGQ9UMZ2 1314 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 SLC25A27O95847 323 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 RASA1P20936 1047 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 KCTD2Q14681 263 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 CHMP4CQ96CF2 233 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 RNPC3Q96LT9 517 aaKnown RBP15.49■□□□□ 0.07
LINC00339-203ENST00000420503 CCDC17Q96LX7 622 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 SH2D4AQ9H788 454 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 DDX49Q9Y6V7 483 aaKnown RBP15.49■□□□□ 0.07
LINC00339-203ENST00000420503 ROBO3Q96MS0 1386 aa15.49■□□□□ 0.07
LINC00339-203ENST00000420503 KIAA0355O15063 1070 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 NDUFB10O96000 172 aa15.48■□□□□ 0.07
LINC00339-203ENST00000420503 SMAD3P84022 425 aaKnown RBP15.48■□□□□ 0.07
LINC00339-203ENST00000420503 FAAP100Q0VG06 881 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms