RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 KLRC3Q07444 240 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 HABP4Q5JVS0 413 aaKnown RBP18.89■□□□□ 0.61
NOD1-204ENST00000419601 FAM83BQ5T0W9 1011 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 ZNF589Q86UQ0 364 aaPredicted RBP18.89■□□□□ 0.61
NOD1-204ENST00000419601 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 MKL1Q969V6 931 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 APBA2Q99767 749 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 MOV10L1Q9BXT6 1211 aaKnown RBP18.89■□□□□ 0.61
NOD1-204ENST00000419601 PAK6Q9NQU5 681 aaPredicted RBP18.89■□□□□ 0.61
NOD1-204ENST00000419601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
NOD1-204ENST00000419601 ZMYM6O95789 1325 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 CCDC171Q6TFL3 1326 aa18.89■□□□□ 0.61
NOD1-204ENST00000419601 HIP1O00291 1037 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 SGPL1O95470 568 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 HSPD1P10809 573 aaKnown RBP18.88■□□□□ 0.61
NOD1-204ENST00000419601 TFAP4Q01664 338 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 FAM47AQ5JRC9 791 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 PPP4R3BQ5MIZ7 849 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
NOD1-204ENST00000419601 HMX1Q9NP08 348 aaPredicted RBP18.88■□□□□ 0.61
NOD1-204ENST00000419601 ADAMTS5Q9UNA0 930 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 RPTORQ8N122 1335 aa18.88■□□□□ 0.61
NOD1-204ENST00000419601 STRNO43815 780 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 NDUFB10O96000 172 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 FGAP02671 866 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 GRB14Q14449 540 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 PLS1Q14651 629 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.87■□□□□ 0.61
NOD1-204ENST00000419601 MROH8Q9H579 483 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 DIAPH3Q9NSV4 1193 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 FBXO28Q9NVF7 368 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
NOD1-204ENST00000419601 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 ORC4O43929 436 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 ERCC3P19447 782 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 TRIM32Q13049 653 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 MAP3K21Q5TCX8 1036 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 GMCL1P1Q8NEA9 526 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 NUP88Q99567 741 aaPredicted RBP18.86■□□□□ 0.61
NOD1-204ENST00000419601 ZNF236Q9UL36 1845 aa18.86■□□□□ 0.61
NOD1-204ENST00000419601 VWA5AO00534 786 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 TFRCP02786 760 aaKnown RBP18.85■□□□□ 0.61
NOD1-204ENST00000419601 HOXC6P09630 235 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 FGRP09769 529 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 PRKAR2AP13861 404 aaKnown RBP18.85■□□□□ 0.61
NOD1-204ENST00000419601 PDE4AP27815 886 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 TMEM132BQ14DG7 1078 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 CCL14Q16627 93 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 CWC27Q6UX04 472 aaKnown RBP18.85■□□□□ 0.61
NOD1-204ENST00000419601 SLF1Q9BQI6 1058 aa18.85■□□□□ 0.61
NOD1-204ENST00000419601 COL11A1P12107 1806 aaPredicted RBP18.85■□□□□ 0.61
NOD1-204ENST00000419601 RANBP6O60518 1105 aaKnown RBP18.84■□□□□ 0.61
NOD1-204ENST00000419601 SLC25A27O95847 323 aa18.84■□□□□ 0.61
NOD1-204ENST00000419601 NCAPG2Q86XI2 1143 aa18.84■□□□□ 0.61
NOD1-204ENST00000419601 ABRAQ8N0Z2 381 aa18.84■□□□□ 0.61
NOD1-204ENST00000419601 LRRC47Q8N1G4 583 aaKnown RBP18.84■□□□□ 0.61
NOD1-204ENST00000419601 PRPF38AQ8NAV1 312 aaKnown RBP18.84■□□□□ 0.61
NOD1-204ENST00000419601 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
NOD1-204ENST00000419601 INCENPQ9NQS7 918 aa18.84■□□□□ 0.61
NOD1-204ENST00000419601 FARP2O94887 1054 aaPredicted RBP18.83■□□□□ 0.6
NOD1-204ENST00000419601 ADORA2AP29274 412 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 CACNB2Q08289 660 aaPredicted RBP18.83■□□□□ 0.6
NOD1-204ENST00000419601 TTC22Q5TAA0 569 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 UBE2Q1Q7Z7E8 422 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 DPP9Q86TI2 863 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 RIOX2Q8IUF8 465 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 TOMM22Q9NS69 142 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 STX8Q9UNK0 236 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 TACC3Q9Y6A5 838 aa18.83■□□□□ 0.6
NOD1-204ENST00000419601 PCP11498 1178 aaKnown RBP18.82■□□□□ 0.6
NOD1-204ENST00000419601 COPB2P35606 906 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 STAT3P40763 770 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 MFSD14CQ5VZR4 134 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 SLFN13Q68D06 897 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 REPS2Q8NFH8 660 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 SLC5A4Q9NY91 659 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 FEM1BQ9UK73 627 aa18.82■□□□□ 0.6
NOD1-204ENST00000419601 ZNF214Q9UL59 606 aaPredicted RBP18.82■□□□□ 0.6
NOD1-204ENST00000419601 NMT2O60551 498 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 FCER1AP12319 257 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 BMP3P12645 472 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
NOD1-204ENST00000419601 HAND2P61296 217 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 NPLOC4Q8TAT6 608 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 FLRT1Q9NZU1 646 aa18.81■□□□□ 0.6
NOD1-204ENST00000419601 ZBED4O75132 1171 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 RRP12Q5JTH9 1297 aaKnown RBP18.8■□□□□ 0.6
NOD1-204ENST00000419601 AKNAD1Q5T1N1 836 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 MFSD6Q6ZSS7 791 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 ANKLE1Q8NAG6 615 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
NOD1-204ENST00000419601 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
NOD1-204ENST00000419601 CTDP1Q9Y5B0 961 aaPredicted RBP18.8■□□□□ 0.6
NOD1-204ENST00000419601 ZNF213O14771 459 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms