RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 TMED8Q6PL24 325 aaPredicted RBP17.18■□□□□ 0.34
TTC38-202ENST00000417709 TINF2Q9BSI4 451 aa17.18■□□□□ 0.34
TTC38-202ENST00000417709 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
TTC38-202ENST00000417709 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
TTC38-202ENST00000417709 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
TTC38-202ENST00000417709 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
TTC38-202ENST00000417709 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
TTC38-202ENST00000417709 GOLIM4O00461 696 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 PRKAB2O43741 272 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 RAD21O60216 631 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 SLC25A27O95847 323 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
TTC38-202ENST00000417709 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
TTC38-202ENST00000417709 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 FBXO28Q9NVF7 368 aa17.17■□□□□ 0.34
TTC38-202ENST00000417709 MYH8P13535 1937 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 A0A1W2PQ45 241 aaPredicted RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 A0A1W2PQY0 241 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 APBB1O00213 710 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 STAT3P40763 770 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 ICA1Q05084 483 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 FPGSQ05932 587 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 KCTD2Q14681 263 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 LENG1Q96BZ8 264 aaPredicted RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
TTC38-202ENST00000417709 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
TTC38-202ENST00000417709 ZNF236Q9UL36 1845 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 CYP2D7A0A087X1C5 515 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 RLBP1P12271 317 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 FAAP100Q0VG06 881 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 ZNF792Q3KQV3 632 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 ERC1Q8IUD2 1116 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 NRBP1Q9UHY1 535 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 NAV1Q8NEY1 1877 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 PLXNA1Q9UIW2 1896 aa17.15■□□□□ 0.34
TTC38-202ENST00000417709 BAZ2AQ9UIF9 1905 aaKnown RBP17.15■□□□□ 0.34
TTC38-202ENST00000417709 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 WDR46O15213 610 aaKnown RBP17.14■□□□□ 0.33
TTC38-202ENST00000417709 ZNF865P0CJ78 1059 aaPredicted RBP17.14■□□□□ 0.33
TTC38-202ENST00000417709 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
TTC38-202ENST00000417709 SLC4A3P48751 1232 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 CDK8P49336 464 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 RIOX2Q8IUF8 465 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 USP38Q8NB14 1042 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 VTI1AQ96AJ9 217 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 ADAMTS5Q9UNA0 930 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
TTC38-202ENST00000417709 VWA5AO00534 786 aa17.13■□□□□ 0.33
TTC38-202ENST00000417709 DNAJB2P25686 324 aa17.13■□□□□ 0.33
TTC38-202ENST00000417709 ACLYP53396 1101 aa17.13■□□□□ 0.33
TTC38-202ENST00000417709 KCNA10Q16322 511 aa17.13■□□□□ 0.33
TTC38-202ENST00000417709 ZNF576Q9H609 170 aa17.13■□□□□ 0.33
TTC38-202ENST00000417709 DIS3Q9Y2L1 958 aaKnown RBP17.13■□□□□ 0.33
TTC38-202ENST00000417709 TMEM265A0A087WTH1 108 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 USP17L21D6R901 530 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 MBD4O95243 580 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 TIMP1P01033 207 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 AKR1A1P14550 325 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 RHPN1Q8TCX5 695 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 TSEN34Q9BSV6 310 aaKnown RBP17.12■□□□□ 0.33
TTC38-202ENST00000417709 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
TTC38-202ENST00000417709 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 REV3LO60673 3130 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 ADAMTS4O75173 837 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
TTC38-202ENST00000417709 TJAP1Q5JTD0 557 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 C16orf59Q7L2K0 433 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 ANKRD33Q7Z3H0 272 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.332e-7■■■□□ 14.8
TTC38-202ENST00000417709 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 PARP14Q460N5 1801 aa17.11■□□□□ 0.33
TTC38-202ENST00000417709 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
TTC38-202ENST00000417709 HSP90AB4PQ58FF6 505 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
TTC38-202ENST00000417709 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms