RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 UIMC1Q96RL1 719 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 FAM129BQ96TA1 746 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 ZCCHC17Q9NP64 241 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 POLKQ9UBT6 870 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 PFASO15067 1338 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 LAMB2P55268 1798 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 WNT10BO00744 389 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 GPR182O15218 404 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 ELNP15502 786 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 FCGRTP55899 365 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 GNASQ5JWF2 1037 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 TMC4Q7Z404 712 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 GMLQ99445 158 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 ELP3Q9H9T3 547 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
ECHDC1-206ENST00000417628 UBN2Q6ZU65 1347 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 BDP1A6H8Y1 2624 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 SPATA31C2B4DYI2 1134 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 PI4K2BG5E9Z4 385 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 CAPN5O15484 640 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 NTSR2O95665 410 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 ZAP70P43403 619 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 KCNQ1P51787 676 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 RBM10P98175 930 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 GRAPQ13588 217 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 PDE3AQ14432 1141 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 CCDC85BQ15834 202 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 C9orf50Q5SZB4 431 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 C17orf99Q6UX52 265 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 GJD3Q8N144 294 aa7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 GRAPLQ8TC17 118 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-206ENST00000417628 SCN9AQ15858 1988 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 RRP9O43818 475 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 SASH1O94885 1247 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 PDGFAP04085 211 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 VAMP1P23763 118 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 PHKA2P46019 1235 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 PLCB3Q01970 1234 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 LRRC26Q2I0M4 334 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 SUSD4Q5VX71 490 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 DDX46Q7L014 1031 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 TREML1Q86YW5 311 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 EDEM1Q92611 657 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 ZNF576Q9H609 170 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 POLLQ9UGP5 575 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 CPA4Q9UI42 421 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 GABRQQ9UN88 632 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 NSFL1CQ9UNZ2 370 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 PPP2R3BQ9Y5P8 575 aa7.04□□□□□ -1.28
ECHDC1-206ENST00000417628 BAHCC1Q9P281 2608 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 BTBD19C9JJ37 291 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 GFRA3O60609 400 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 CETPP11597 493 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 GPTP24298 496 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 TFF2Q03403 129 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 DNM1Q05193 864 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 EHHADHQ08426 723 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 POU4F2Q12837 409 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 SUPT20HL1Q3ZLR7 823 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 PODNQ7Z5L7 613 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 ZC3H12CQ9C0D7 883 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 DEFB129Q9H1M3 183 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 PRKAG2Q9UGJ0 569 aa7.03□□□□□ -1.28
ECHDC1-206ENST00000417628 LTBP2Q14767 1821 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 ERVV-1B6SEH8 477 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 OPLAHO14841 1288 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 MICAL2O94851 1124 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 NBPF10Q6P3W6 841 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 ZNF280CQ8ND82 737 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 RNF217Q8TC41 542 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 RHPN1Q8TCX5 695 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 NIF3L1Q9GZT8 377 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 DMGDHQ9UI17 866 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 USP16Q9Y5T5 823 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 OTOFQ9HC10 1997 aa7.02□□□□□ -1.29
ECHDC1-206ENST00000417628 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 MAST2Q6P0Q8 1798 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 U2AF1L5P0DN76 240 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 COL6A1P12109 1028 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 BMP2P12643 396 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 HSP90B1P14625 803 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 ATP4AP20648 1035 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 FLT3LGP49771 235 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 GPSM2P81274 684 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 U2AF1Q01081 240 aaKnown RBP eCLIP7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 TEFQ10587 303 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 ACAP1Q15027 740 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms