RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 HOXA10P31260 410 aaPredicted RBP9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 SSTR4P31391 388 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 CD97P48960 835 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 RBM25P49756 843 aaKnown RBP9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 HDLBPQ00341 1268 aaKnown RBP9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 CWF19L2Q2TBE0 894 aaKnown RBP9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 BRINP3Q76B58 766 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 TJP2Q9UDY2 1190 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 ADAM30Q9UKF2 790 aa9.16□□□□□ -0.94
GTF3AP1-201ENST00000416942 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 GRIN3BO60391 1043 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 MED26O95402 600 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 PLCG1P19174 1290 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 CRKP46108 304 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 RACK1P63244 317 aaKnown RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 LRP8Q14114 963 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 DDX17Q92841 729 aaKnown RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 ACSF2Q96CM8 615 aaPredicted RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 LRRC4CQ9HCJ2 640 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 UBP1Q9NZI7 540 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 SHPRHQ149N8 1683 aa9.15□□□□□ -0.94
GTF3AP1-201ENST00000416942 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.95
GTF3AP1-201ENST00000416942 CST3P01034 146 aaPredicted RBP9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 C9orf131Q5VYM1 1079 aa9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 MFSD2AQ8NA29 543 aa9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
GTF3AP1-201ENST00000416942 AHDC1Q5TGY3 1603 aaPredicted RBP9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 HTR3BO95264 441 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 APOBRQ0VD83 1088 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 TMEM201Q5SNT2 666 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 ARTNQ5T4W7 220 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 SLC6A19Q695T7 634 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 NT5DC4Q86YG4 428 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 MCATQ8IVS2 390 aaKnown RBP9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 DPH2Q9BQC3 489 aaPredicted RBP9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
GTF3AP1-201ENST00000416942 HYAL3O43820 417 aaPredicted RBP9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 SLITRK5O94991 958 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 IDI1Q13907 227 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 SEZ6Q53EL9 994 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 MIPEPQ99797 713 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 C19orf44Q9H6X5 657 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 PCMTD2Q9NV79 361 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 REV1Q9UBZ9 1251 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 TET3O43151 1660 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 DIP2AQ14689 1571 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 MTUS2Q5JR59 1369 aa9.12□□□□□ -0.95
GTF3AP1-201ENST00000416942 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 EOMESO95936 686 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 TSPY4P0CV99 314 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 TSPY10P0CW01 314 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 FAM214BQ7L5A3 538 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 NKD1Q969G9 470 aa9.11□□□□□ -0.95
GTF3AP1-201ENST00000416942 KDM5AP29375 1690 aaKnown RBP9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 CCDC141Q6ZP82 1450 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 UPK3BL1B0FP48 263 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 UPK3BL2E5RIL1 263 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 LETMD1Q6P1Q0 360 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 DTX1Q86Y01 620 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 SLITRK4Q8IW52 837 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 Q8N3U1 123 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 FAM13CQ8NE31 585 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 HEXIM2Q96MH2 286 aaKnown RBP9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 ZFP64Q9NPA5 681 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 ZC3H7BQ9UGR2 993 aaKnown RBP9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 PCDHB14Q9Y5E9 798 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 NWD1Q149M9 1564 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 MAST1Q9Y2H9 1570 aa9.1□□□□□ -0.95
GTF3AP1-201ENST00000416942 SPINK2P20155 84 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 KLHL3Q9UH77 587 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 GTF2IRD1Q9UHL9 959 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 U3KQE9 123 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 PNPLA6Q8IY17 1366 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 PIK3C2BO00750 1634 aa9.09□□□□□ -0.95
GTF3AP1-201ENST00000416942 SETD5Q9C0A6 1442 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 ATE1O95260 518 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 ARHGAP27Q6ZUM4 889 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 REXO1Q8N1G1 1221 aaKnown RBP9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 RIN3Q8TB24 985 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 PRDM5Q9NQX1 630 aaPredicted RBP9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 EFCAB6Q5THR3 1501 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms