RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ERCC3P19447 782 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 FAM83BQ5T0W9 1011 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 REPS2Q8NFH8 660 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 DPF3Q92784 378 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 PCDH10Q9P2E7 1040 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 TACC3Q9Y6A5 838 aa18.06■□□□□ 0.48
UBXN4-203ENST00000416538 PFASO15067 1338 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 PATL2C9JE40 543 aaKnown RBP18.05■□□□□ 0.48
UBXN4-203ENST00000416538 GNAT2P19087 354 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 ADORA2AP29274 412 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 LHX8Q68G74 356 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 SHCBP1Q8NEM2 672 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 TRPV1Q8NER1 839 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 HTATIP2Q9BUP3 242 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 CWC22Q9HCG8 908 aaKnown RBP18.05■□□□□ 0.48
UBXN4-203ENST00000416538 HOXC10Q9NYD6 342 aa18.05■□□□□ 0.48
UBXN4-203ENST00000416538 LCTP09848 1927 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 COBLO75128 1261 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 NDUFB10O96000 172 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 APPP05067 770 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 CYP2C19P33261 490 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 SMC5Q8IY18 1101 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 TRMT44Q8IYL2 757 aaKnown RBP18.04■□□□□ 0.48
UBXN4-203ENST00000416538 MB21D1Q8N884 522 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 CEP95Q96GE4 821 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 NYAP2Q9P242 653 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 PPP1R9AQ9ULJ8 1098 aa18.04■□□□□ 0.48
UBXN4-203ENST00000416538 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 IGHDP01880 384 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 PPARAQ07869 468 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 PLS1Q14651 629 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 ANKLE1Q8NAG6 615 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 MKNK2Q9HBH9 465 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 GOPCQ9HD26 462 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 ZNF214Q9UL59 606 aaPredicted RBP18.03■□□□□ 0.48
UBXN4-203ENST00000416538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.03■□□□□ 0.48
UBXN4-203ENST00000416538 IVNS1ABPQ9Y6Y0 642 aa18.03■□□□□ 0.48
UBXN4-203ENST00000416538 LRRC37A2A6NM11 1700 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 VWA5AO00534 786 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 RAD21O60216 631 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 CYBAP13498 195 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 FXR1P51114 621 aaKnown RBP eCLIP18.02■□□□□ 0.48
UBXN4-203ENST00000416538 RASGRP2Q7LDG7 609 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 NECAB2Q7Z6G3 386 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
UBXN4-203ENST00000416538 FAM227BQ96M60 508 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 NAPBQ9H115 298 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
UBXN4-203ENST00000416538 LTBP2Q14767 1821 aa18.01■□□□□ 0.47
UBXN4-203ENST00000416538 COL6A1P12109 1028 aa18.01■□□□□ 0.47
UBXN4-203ENST00000416538 LRRFIP1Q32MZ4 808 aaKnown RBP18.01■□□□□ 0.47
UBXN4-203ENST00000416538 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
UBXN4-203ENST00000416538 EVI5LQ96CN4 794 aa18.01■□□□□ 0.47
UBXN4-203ENST00000416538 MTMR4Q9NYA4 1195 aa18.01■□□□□ 0.47
UBXN4-203ENST00000416538 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
UBXN4-203ENST00000416538 F5H6K3 240 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 CAPN2P17655 700 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 CTDSPL2Q05D32 466 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 KLRC3Q07444 240 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 MFSD14CQ5VZR4 134 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
UBXN4-203ENST00000416538 RIOX2Q8IUF8 465 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
UBXN4-203ENST00000416538 OLFML2BQ68BL8 750 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 C7orf61Q8IZ16 206 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 NEDD1Q8NHV4 660 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 SLF1Q9BQI6 1058 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 NACAP1Q9BZK3 213 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 MROH8Q9H579 483 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 C11orf49Q9H6J7 331 aa17.99■□□□□ 0.47
UBXN4-203ENST00000416538 STRNO43815 780 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 EVI5O60447 810 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 NMT2O60551 498 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 PGK2P07205 417 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
UBXN4-203ENST00000416538 DPP9Q86TI2 863 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 MKL1Q969V6 931 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 MAML3Q96JK9 1138 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
UBXN4-203ENST00000416538 RIPK3Q9Y572 518 aa17.98■□□□□ 0.47
UBXN4-203ENST00000416538 SZT2Q5T011 3432 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 TTLL1O95922 423 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 TFAP4Q01664 338 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 AAMPQ13685 434 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 ANO1Q5XXA6 986 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 PLEKHM2Q8IWE5 1019 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-203ENST00000416538 ABRAQ8N0Z2 381 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms