RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 VPS54Q9P1Q0 977 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 CFAP45Q9UL16 551 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 KCNJ14Q9UNX9 436 aa26.58■■□□□ 1.85
PARD3B-205ENST00000415947 SOCS7O14512 581 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 FIBPO43427 364 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 ASNSP08243 561 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 SCAND2PQ9GZW5 306 aaPredicted RBP26.57■■□□□ 1.84
PARD3B-205ENST00000415947 ARHGEF10LQ9HCE6 1279 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 GINM1Q9NU53 330 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 TFIP11Q9UBB9 837 aaKnown RBP26.57■■□□□ 1.84
PARD3B-205ENST00000415947 DCAF15Q66K64 600 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 SLFN13Q68D06 897 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 ZNF396Q96N95 335 aaPredicted RBP26.57■■□□□ 1.84
PARD3B-205ENST00000415947 SH3GLB2Q9NR46 395 aa26.57■■□□□ 1.84
PARD3B-205ENST00000415947 A0A1W2PRG0 241 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 GLTPD2A6NH11 291 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 F5H6K3 240 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 KLRC3Q07444 240 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 DIS3L2Q8IYB7 885 aaKnown RBP26.56■■□□□ 1.84
PARD3B-205ENST00000415947 PIBF1Q8WXW3 757 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 GMCL1Q96IK5 515 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 UBA5Q9GZZ9 404 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 FOXP1Q9H334 677 aaPredicted RBP26.56■■□□□ 1.84
PARD3B-205ENST00000415947 CPVLQ9H3G5 476 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 GPCPD1Q9NPB8 672 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 TMX2Q9Y320 296 aa26.56■■□□□ 1.84
PARD3B-205ENST00000415947 CTNND1O60716 968 aaKnown RBP26.55■■□□□ 1.84
PARD3B-205ENST00000415947 VEGFAP15692 232 aaPredicted RBP26.55■■□□□ 1.84
PARD3B-205ENST00000415947 RRP36Q96EU6 259 aaKnown RBP26.55■■□□□ 1.84
PARD3B-205ENST00000415947 ELP1O95163 1332 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 BTBD18B2RXH4 712 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 SLC1A4P43007 532 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 GNL2Q13823 731 aaKnown RBP26.54■■□□□ 1.84
PARD3B-205ENST00000415947 MYSM1Q5VVJ2 828 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 FAM177A1Q8N128 213 aaPredicted RBP26.54■■□□□ 1.84
PARD3B-205ENST00000415947 CCDC96Q2M329 555 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 ZNF341Q9BYN7 854 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 ZNF112Q9UJU3 913 aa26.54■■□□□ 1.84
PARD3B-205ENST00000415947 NDUFB10O96000 172 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 KLHL40Q2TBA0 621 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 USP50Q70EL3 339 aaPredicted RBP26.53■■□□□ 1.84
PARD3B-205ENST00000415947 KCTD1Q719H9 257 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 NOSTRINQ8IVI9 506 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 ACER1Q8TDN7 264 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 SPATA32Q96LK8 384 aa26.53■■□□□ 1.84
PARD3B-205ENST00000415947 DDX49Q9Y6V7 483 aaKnown RBP26.53■■□□□ 1.84
PARD3B-205ENST00000415947 POLR2AP24928 1970 aaKnown RBP26.53■■□□□ 1.84
PARD3B-205ENST00000415947 ATAD5Q96QE3 1844 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 ECE1P42892 770 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 PRAMEF18Q5VWM3 479 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 TTBK2Q6IQ55 1244 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 LEO1Q8WVC0 666 aaPredicted RBP26.52■■□□□ 1.84
PARD3B-205ENST00000415947 DCPSQ96C86 337 aaKnown RBP26.52■■□□□ 1.84
PARD3B-205ENST00000415947 USP28Q96RU2 1077 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 BARHL2Q9NY43 387 aa26.52■■□□□ 1.84
PARD3B-205ENST00000415947 SEC63Q9UGP8 760 aaKnown RBP26.52■■□□□ 1.84
PARD3B-205ENST00000415947 NPY5RQ15761 445 aa26.51■■□□□ 1.83
PARD3B-205ENST00000415947 SUPT20HL1Q3ZLR7 823 aa26.51■■□□□ 1.83
PARD3B-205ENST00000415947 PIGSQ96S52 555 aa26.51■■□□□ 1.83
PARD3B-205ENST00000415947 SH2D4AQ9H788 454 aa26.51■■□□□ 1.83
PARD3B-205ENST00000415947 VAT1LQ9HCJ6 419 aa26.51■■□□□ 1.83
PARD3B-205ENST00000415947 RAD21O60216 631 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 EPHX2P34913 555 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 KRT2P35908 639 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 WWC2Q6AWC2 1192 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 ADGRF4Q8IZF3 695 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 GPKOWQ92917 476 aaPredicted RBP eCLIP26.5■■□□□ 1.83
PARD3B-205ENST00000415947 JMJD4Q9H9V9 463 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 BRMS1Q9HCU9 246 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 RTEL1Q9NZ71 1219 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 RCOR1Q9UKL0 485 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 GADD45BO75293 160 aaPredicted RBP26.5■■□□□ 1.83
PARD3B-205ENST00000415947 CALML3P27482 149 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 NLRP5P59047 1200 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 UBE2HP62256 183 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 GPT2Q8TD30 523 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 OXER1Q8TDS5 423 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 ZC3H15Q8WU90 426 aaKnown RBP26.5■■□□□ 1.83
PARD3B-205ENST00000415947 MTMR8Q96EF0 704 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 GOPCQ9HD26 462 aa26.5■■□□□ 1.83
PARD3B-205ENST00000415947 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.5■■□□□ 1.83
PARD3B-205ENST00000415947 hCG_1984214I3L0E3 225 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 STXBP3O00186 592 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 MBD3O95983 291 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 BMP3P12645 472 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 NR5A1Q13285 461 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 HEATR3Q7Z4Q2 680 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 HOMER1Q86YM7 354 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 ZNF713Q8N859 430 aaPredicted RBP26.49■■□□□ 1.83
PARD3B-205ENST00000415947 CCDC148Q8NFR7 591 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 POLR3EQ9NVU0 708 aa26.49■■□□□ 1.83
PARD3B-205ENST00000415947 SCN4AP35499 1836 aa26.48■■□□□ 1.83
PARD3B-205ENST00000415947 INPP5BP32019 993 aa26.48■■□□□ 1.83
PARD3B-205ENST00000415947 TYW1BQ6NUM6 668 aa26.48■■□□□ 1.83
PARD3B-205ENST00000415947 SULF1Q8IWU6 871 aa26.48■■□□□ 1.83
PARD3B-205ENST00000415947 FTOQ9C0B1 505 aaKnown RBP eCLIP26.48■■□□□ 1.83
PARD3B-205ENST00000415947 PNMA6FA0A0J9YX94 578 aa26.47■■□□□ 1.83
PARD3B-205ENST00000415947 SLC16A2P36021 539 aa26.47■■□□□ 1.83
PARD3B-205ENST00000415947 GALNT17Q6IS24 598 aa26.47■■□□□ 1.83
PARD3B-205ENST00000415947 VCPKMTQ9H867 229 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms