RNA–Protein interactions for RNA: ENST00000415624.5

TRAPPC12-204, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS ALT2 TSL 5

Gene TRAPPC12, Length 815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-204ENST00000415624 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SPP2Q13103 211 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 ERO1BQ86YB8 467 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 RASAL3Q86YV0 1011 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SIAH1Q8IUQ4 282 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 NUP88Q99567 741 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 NCOA5Q9HCD5 579 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
TRAPPC12-204ENST00000415624 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 DTNBO60941 627 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 NDUFB10O96000 172 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 EN2P19622 333 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 GJA5P36382 358 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 NOVP48745 357 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 ME3Q16798 604 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 RTN1Q16799 776 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 KIAA1755Q5JYT7 1200 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 WNK4Q96J92 1243 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 LIMCH1Q9UPQ0 1083 aa12.78□□□□□ -0.36
TRAPPC12-204ENST00000415624 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.36
TRAPPC12-204ENST00000415624 A0A0G2JMZ2 1700 aa12.77□□□□□ -0.36
TRAPPC12-204ENST00000415624 RBBP6Q7Z6E9 1792 aaKnown RBP12.77□□□□□ -0.36
TRAPPC12-204ENST00000415624 PDHBP11177 359 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 HMGCS2P54868 508 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 ST3GAL1Q11201 340 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 PPIL2Q13356 520 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 SLFN13Q68D06 897 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 GADL1Q6ZQY3 521 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 TMTC2Q8N394 836 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 SNX21Q969T3 373 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 WDR18Q9BV38 432 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 KIAA1683Q9H0B3 1180 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 TMX2Q9Y320 296 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 NID2Q14112 1375 aa12.77□□□□□ -0.37
TRAPPC12-204ENST00000415624 LAMA3Q16787 3333 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 USP17L10C9JJH3 530 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 H0YGN5 161 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 IRF6O14896 467 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 CDC27P30260 824 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 MCM2P49736 904 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 GRM4Q14833 912 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 FAM83BQ5T0W9 1011 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 KCTD1Q719H9 257 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 RLFQ13129 1914 aa12.76□□□□□ -0.37
TRAPPC12-204ENST00000415624 F5H6K3 240 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 CALM1P0DP23 149 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 CALM2P0DP24 149 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 CALM3P0DP25 149 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 VCAM1P19320 739 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 SLC1A4P43007 532 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 BACE1P56817 501 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 PPATQ06203 517 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 KLRC3Q07444 240 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 ZNF543Q08ER8 600 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 SCRN1Q12765 414 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 TROAPQ12815 778 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 BECN1Q14457 450 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 GMCL1P1Q8NEA9 526 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 MKL1Q969V6 931 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 ZSCAN31Q96LW9 406 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 CPVLQ9H3G5 476 aa12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 SH2B1Q9NRF2 756 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-204ENST00000415624 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms