RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 PDE3AQ14432 1141 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 ARHGAP31Q2M1Z3 1444 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 PLEKHN1Q494U1 663 aaPredicted RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 DMRTC1Q5HYR2 192 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 NUP188Q5SRE5 1749 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 FAM166AQ6J272 317 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 TIPARPQ7Z3E1 657 aaKnown RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 GPR155Q7Z3F1 870 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 KRT27Q7Z3Y8 459 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 CDH24Q86UP0 819 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 TMTC1Q8IUR5 882 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 CNTROBQ8N137 903 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 KLHL34Q8N239 644 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 FNBP4Q8N3X1 1017 aaPredicted RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 LARGE2Q8N3Y3 721 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 SLC44A3Q8N4M1 653 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 CCDC185Q8N715 623 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 DNAJB8Q8NHS0 232 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 C7orf43Q8WVR3 580 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 HERVK_113Q902F9 699 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 NDRG1Q92597 394 aaKnown RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 ARHGEF1Q92888 912 aaKnown RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 FERMT2Q96AC1 680 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 GJD4Q96KN9 370 aaPredicted RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 FCRL3Q96P31 734 aaPredicted RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 ERBINQ96RT1 1412 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 SPRY4Q9C004 299 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 ZC3H12CQ9C0D7 883 aaKnown RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 CXXC4Q9H2H0 198 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 KCNN2Q9H2S1 579 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 RNF39Q9H2S5 420 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 NKX2-4Q9H2Z4 354 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 HMX1Q9NP08 348 aaPredicted RBP-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 PARD6AQ9NPB6 346 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 PLSCR2Q9NRY7 297 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 DZANK1Q9NVP4 752 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 APEX2Q9UBZ4 518 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 KLK13Q9UKR3 277 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 PHTF1Q9UMS5 762 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 FHOD1Q9Y613 1164 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 SBNO2Q9Y2G9 1366 aa-0.34□□□□□ -2.46
SNX3P1X-201ENST00000414887 TEX14Q8IWB6 1497 aa-0.35□□□□□ -2.46
SNX3P1X-201ENST00000414887 ZNF541Q9H0D2 1346 aa-0.35□□□□□ -2.46
SNX3P1X-201ENST00000414887 RALGAPA2Q2PPJ7 1873 aa-0.35□□□□□ -2.46
SNX3P1X-201ENST00000414887 BCORL1Q5H9F3 1711 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 FMN2Q9NZ56 1722 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 ZGRF1Q86YA3 2104 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MAP2P11137 1827 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 BRWD3Q6RI45 1802 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SHTN1A0MZ66 631 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 C19orf67A6NJJ6 358 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 C2CD4DB7Z1M9 353 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 LIASO43766 372 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 LILRB3O75022 631 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PPFIA3O75145 1194 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 AGFG2O95081 481 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 EYA4O95677 639 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 UMODP07911 640 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 ZNF865P0CJ78 1059 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 NOVP48745 357 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MCM2P49736 904 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PDLIM4P50479 330 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 ERVFC1P60507 584 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PPP2R2BQ00005 443 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MEF2BQ02080 365 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MSMPQ1L6U9 139 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 KRTAP19-2Q3LHN2 52 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 VARS2Q5ST30 1063 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 C6orf132Q5T0Z8 1188 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 CHIC1Q5VXU3 224 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SNRNP48Q6IEG0 339 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PLEKHA7Q6IQ23 1121 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PKN3Q6P5Z2 889 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 CRTC1Q6UUV9 634 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 GIGYF2Q6Y7W6 1299 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SPOCD1Q6ZMY3 1216 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 TBC1D9Q6ZT07 1266 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 IRF2BP1Q8IU81 584 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 CHDHQ8NE62 594 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SNIP1Q8TAD8 396 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PIP4K2CQ8TBX8 421 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 BCL7CQ8WUZ0 217 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 PRR11Q96HE9 360 aaPredicted RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SPATA13Q96N96 652 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 BRIP1Q9BX63 1249 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 CHIAQ9BZP6 476 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 RTN4RQ9BZR6 473 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SRCIN1Q9C0H9 1055 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 CCDC86Q9H6F5 360 aaKnown RBP-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 LRTM1Q9HBL6 345 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 RNF186Q9NXI6 227 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 BTG4Q9NY30 223 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MUTYHQ9UIF7 546 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 KLHL21Q9UJP4 597 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 ADAMTS6Q9UKP5 1117 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 UTS2RQ9UKP6 389 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 ENTPD4Q9Y227 616 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 SLCO1B1Q9Y6L6 691 aa-0.35□□□□□ -2.47
SNX3P1X-201ENST00000414887 MYO15BQ96JP2 1530 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms