RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
CNOT4-204ENST00000414802 A0A0G2JMZ2 1700 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 NID2Q14112 1375 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 PLEKHA8P1O95397 391 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 SLC1A4P43007 532 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 SCRN1Q12765 414 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 TREML2Q5T2D2 321 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 CCDC83Q8IWF9 413 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 CTCFLQ8NI51 663 aaPredicted RBP15.3■□□□□ 0.04
CNOT4-204ENST00000414802 SNX21Q969T3 373 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
CNOT4-204ENST00000414802 TMX3Q96JJ7 454 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
CNOT4-204ENST00000414802 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 MAD2L2Q9UI95 211 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
CNOT4-204ENST00000414802 FAM155AB1AL88 458 aaPredicted RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 C19orf81C9J6K1 198 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 CXCL11O14625 94 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 PFKFB2O60825 505 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 PPFIA3O75145 1194 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 PARP1P09874 1014 aaKnown RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 SNHG28P0DPA3 235 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 BMP3P12645 472 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 ZNF543Q08ER8 600 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 MOGSQ13724 837 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 SH3D19Q5HYK7 790 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 CMTR1Q8N1G2 835 aaKnown RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 GTF3C6Q969F1 213 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
CNOT4-204ENST00000414802 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
CNOT4-204ENST00000414802 CCL15-CCL14A0A0B4J2E2 113 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 CALM1P0DP23 149 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 CALM2P0DP24 149 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 CALM3P0DP25 149 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 ADD1P35611 737 aaKnown RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 MCM2P49736 904 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 CCL15Q16663 113 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 ZSCAN31Q96LW9 406 aaPredicted RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 TANGO6Q9C0B7 1094 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 TMEM232C9JQI7 657 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 SLC16A2P36021 539 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 BRI3BPQ8WY22 251 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 LPAR1Q92633 364 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 MS4A4AQ96JQ5 239 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 ZIC5Q96T25 663 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 UBA5Q9GZZ9 404 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 SH2B1Q9NRF2 756 aaPredicted RBP15.28■□□□□ 0.04
CNOT4-204ENST00000414802 FBXO28Q9NVF7 368 aa15.28■□□□□ 0.04
CNOT4-204ENST00000414802 THSD7BQ9C0I4 1608 aa15.27■□□□□ 0.04
CNOT4-204ENST00000414802 RBBP6Q7Z6E9 1792 aaKnown RBP15.27■□□□□ 0.04
CNOT4-204ENST00000414802 PALM3A6NDB9 673 aaPredicted RBP15.27■□□□□ 0.03
CNOT4-204ENST00000414802 RASSF10A6NK89 507 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 GTF2A2P52657 109 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 RCAN1P53805 252 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 TMTC3Q6ZXV5 915 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 NBPF11Q86T75 865 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 CCDC82Q8N4S0 544 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 IL27Q8NEV9 243 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 CAPNS2Q96L46 248 aa15.27■□□□□ 0.03
CNOT4-204ENST00000414802 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 KLRF2D3W0D1 207 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 AOC2O75106 756 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 CETPP11597 493 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 KIF5BP33176 963 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
CNOT4-204ENST00000414802 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
CNOT4-204ENST00000414802 PIBF1Q8WXW3 757 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
CNOT4-204ENST00000414802 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
CNOT4-204ENST00000414802 C1QTNF8P60827 252 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 GPATCH4Q5T3I0 446 aaKnown RBP15.25■□□□□ 0.03
CNOT4-204ENST00000414802 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 PHKBQ93100 1093 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 CCDC102AQ96A19 550 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 BTBD19C9JJ37 291 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 CPLX1O14810 134 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 DHX16O60231 1041 aaKnown RBP15.25■□□□□ 0.03
CNOT4-204ENST00000414802 JAK2O60674 1132 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 FLOT1O75955 427 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 CTDNEP1O95476 244 aa15.25■□□□□ 0.03
CNOT4-204ENST00000414802 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms