RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ERCC6L2Q5T890 1561 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 LAD1O00515 517 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 GPBP1Q86WP2 473 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 TRIML1Q8N9V2 468 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 MASTLQ96GX5 879 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 PSMD1Q99460 953 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 DALRD3Q5D0E6 543 aaKnown RBP19.17■□□□□ 0.66
PHRF1-202ENST00000413872 RNF34Q969K3 372 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 CAPZA3Q96KX2 299 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 KCTD2Q14681 263 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 INF2Q27J81 1249 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 PLA2G4DQ86XP0 818 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
PHRF1-202ENST00000413872 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 MYOCDQ8IZQ8 938 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 RGS12O14924 1447 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 ERCC5P28715 1186 aaPredicted RBP19.17■□□□□ 0.66
PHRF1-202ENST00000413872 CLCN1P35523 988 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 NELFCDQ8IXH7 590 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 ZNF521Q96K83 1311 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 CCDC114Q96M63 670 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 LSG1Q9H089 658 aaKnown RBP19.17■□□□□ 0.66
PHRF1-202ENST00000413872 NRBP2Q9NSY0 501 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 DDX25Q9UHL0 483 aaKnown RBP19.17■□□□□ 0.66
PHRF1-202ENST00000413872 TRPC6Q9Y210 931 aa19.17■□□□□ 0.66
PHRF1-202ENST00000413872 PRPF6O94906 941 aaKnown RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 GABPB2Q8TAK5 448 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 SERTAD1Q9UHV2 236 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 H7C1W4 665 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 LPXNO60711 386 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 N4BP1O75113 896 aaKnown RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 PDIA3P30101 505 aaKnown RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 LONP1P36776 959 aaKnown RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 TTLL6Q8N841 843 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 TPCN1Q9ULQ1 816 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 FAM160B1Q5W0V3 765 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 COL4A3BPQ9Y5P4 624 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 CMA1P23946 247 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 PTPN12Q05209 780 aaKnown RBP19.16■□□□□ 0.66
PHRF1-202ENST00000413872 NCAPG2Q86XI2 1143 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 ADPGKQ9BRR6 497 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
PHRF1-202ENST00000413872 STK10O94804 968 aaKnown RBP19.15■□□□□ 0.66
PHRF1-202ENST00000413872 OSBPP22059 807 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 KRT9P35527 623 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 ZNF445P59923 1031 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 SYT10Q6XYQ8 523 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 PPM1EQ8WY54 764 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 FAM204AQ9H8W3 233 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 HAUS2Q9NVX0 235 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 TBC1D7Q9P0N9 293 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 NARFQ9UHQ1 456 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 PRAMEF22A3QJZ6 481 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 CYP27B1O15528 508 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 TMOD1P28289 359 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 ARMC9Q7Z3E5 817 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 KRT222Q8N1A0 295 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 SLC17A8Q8NDX2 589 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 NAPGQ99747 312 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-202ENST00000413872 CD19P15391 556 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 XKR9Q5GH70 373 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 DBNDD1Q9H9R9 158 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 TAB2Q9NYJ8 693 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
PHRF1-202ENST00000413872 USP17L3A6NCW0 530 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 USP17L4A6NCW7 530 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 TNNI1P19237 187 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 KLHL30Q0D2K2 578 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 USP17L1Q7RTZ2 530 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 SYCE1Q8N0S2 351 aa19.14■□□□□ 0.66
PHRF1-202ENST00000413872 JPH2Q9BR39 696 aaPredicted RBP19.14■□□□□ 0.66
PHRF1-202ENST00000413872 ARHGAP6O43182 974 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 ACTN4O43707 911 aaKnown RBP19.14■□□□□ 0.65
PHRF1-202ENST00000413872 GOLGA8HP0CJ92 632 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 PFKFB1P16118 471 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 GCFC2P16383 781 aaKnown RBP19.14■□□□□ 0.65
PHRF1-202ENST00000413872 FAM182BQ5T319 152 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 CCDC51Q96ER9 411 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 ADD3Q9UEY8 706 aaKnown RBP19.14■□□□□ 0.65
PHRF1-202ENST00000413872 NDC80O14777 642 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 ARL1P40616 181 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-202ENST00000413872 CIAPIN1Q6FI81 312 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 DCUN1D2Q6PH85 259 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 FBXO18Q8NFZ0 1043 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 CUEDC2Q9H467 287 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 PRDM10Q9NQV6 1147 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 CALCOCO1Q9P1Z2 691 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 AFF2P51816 1311 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 ADGRB3O60242 1522 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 KRT19P08727 400 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 MMP10P09238 476 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 XRCC5P13010 732 aaKnown RBP19.14■□□□□ 0.65
PHRF1-202ENST00000413872 TECP42680 631 aa19.14■□□□□ 0.65
PHRF1-202ENST00000413872 MAGEA1P43355 309 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms