RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 SRGAP2O75044 1071 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 CIAO1O76071 339 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 PRPF6O94906 941 aaKnown RBP10.04□□□□□ -0.8
SIK3-202ENST00000413553 FMNL1O95466 1100 aaPredicted RBP10.04□□□□□ -0.8
SIK3-202ENST00000413553 CCT5P48643 541 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 LIG3P49916 1009 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 AMPD2Q01433 879 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 PARP10Q53GL7 1025 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 RRP12Q5JTH9 1297 aaKnown RBP10.04□□□□□ -0.8
SIK3-202ENST00000413553 CDKAL1Q5VV42 579 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 LDHAL6AQ6ZMR3 332 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 EPSTI1Q96J88 318 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 CNNM1Q9NRU3 951 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 TAB2Q9NYJ8 693 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 MYH6P13533 1939 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 A0A087WUV0 522 aaPredicted RBP10.04□□□□□ -0.8
SIK3-202ENST00000413553 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 PDE8AO60658 829 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 ITGA6P23229 1130 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 RFC4P35249 363 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 GGCXP38435 758 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 AARSP49588 968 aaKnown RBP eCLIP10.04□□□□□ -0.8
SIK3-202ENST00000413553 CUL4BQ13620 913 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
SIK3-202ENST00000413553 KRT31Q15323 416 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 FAM76AQ8TAV0 307 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 MMS19Q96T76 1030 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 GREM2Q9H772 168 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 CHD4Q14839 1912 aa10.04□□□□□ -0.8
SIK3-202ENST00000413553 CDHR2Q9BYE9 1310 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 STK36Q9NRP7 1315 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 A0A087X0B3 334 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 RNF225M0QZC1 329 aaPredicted RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 ERLIN2O94905 339 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 RXRBP28702 533 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 CTSWP56202 376 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 SPATA20Q8TB22 786 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 OXER1Q8TDS5 423 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 COG1Q8WTW3 980 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 MYCBPQ99417 103 aaPredicted RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 CHP1Q99653 195 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 TJP1Q07157 1748 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 NUP188Q5SRE5 1749 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 ITIH6Q6UXX5 1313 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 CNTNAP4Q9C0A0 1308 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 GOLGA6CA6NDK9 693 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 ATP1A1P05023 1023 aaKnown RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 GOLGA6DP0CG33 693 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 TRAPPC3LQ5T215 181 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 TTLL11Q8NHH1 800 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 NCAPGQ9BPX3 1015 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 HINFPQ9BQA5 517 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 FOXP1Q9H334 677 aaPredicted RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 GOLGA6AQ9NYA3 693 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 TFR2Q9UP52 801 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 SAR1BQ9Y6B6 198 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 EBAG9O00559 213 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 NDUFA10O95299 355 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 IFNAR1P17181 557 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 ADD2P35612 726 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 RTN1Q16799 776 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 CCDC122Q5T0U0 273 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 RRAGBQ5VZM2 374 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 CLEC4GQ6UXB4 293 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 SGMS1Q86VZ5 419 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 PAGE5Q96GU1 130 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
SIK3-202ENST00000413553 EPN1Q9Y6I3 576 aaPredicted RBP10.03□□□□□ -0.8
SIK3-202ENST00000413553 THSD7AQ9UPZ6 1657 aa10.02□□□□□ -0.8
SIK3-202ENST00000413553 MYH13Q9UKX3 1938 aa10.02□□□□□ -0.8
SIK3-202ENST00000413553 SEMA3EO15041 775 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 MCAMP43121 646 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 COPB1P53618 953 aaKnown RBP10.02□□□□□ -0.81
SIK3-202ENST00000413553 RC3H1Q5TC82 1133 aaKnown RBP10.02□□□□□ -0.81
SIK3-202ENST00000413553 TRAPPC11Q7Z392 1133 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 SYMPKQ92797 1274 aaKnown RBP10.02□□□□□ -0.81
SIK3-202ENST00000413553 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 KAT14Q9H8E8 782 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 ZSWIM5Q9P217 1185 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 SRP68Q9UHB9 627 aaKnown RBP10.02□□□□□ -0.81
SIK3-202ENST00000413553 ZNF532Q9HCE3 1301 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 GOLGA6BA6NDN3 693 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 CPP00450 1065 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 UBXN1Q04323 297 aa10.02□□□□□ -0.81
SIK3-202ENST00000413553 METTL24Q5JXM2 366 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms