RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 VPS16Q9H269 839 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 LCMT1Q9UIC8 334 aa19.88■□□□□ 0.77
SDCBP-202ENST00000413219 RNF225M0QZC1 329 aaPredicted RBP19.87■□□□□ 0.77
SDCBP-202ENST00000413219 USP14P54578 494 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 MAP9Q49MG5 647 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 CCDC102AQ96A19 550 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 TAB2Q9NYJ8 693 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 ERVV-1B6SEH8 477 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 PTGDRQ13258 359 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 ZNF174Q15697 407 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 CATIPQ7Z7H3 387 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 NELFBQ8WX92 580 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 ASAP1Q9ULH1 1129 aa19.87■□□□□ 0.77
SDCBP-202ENST00000413219 A0A1W2PQC6 194 aa19.86■□□□□ 0.77
SDCBP-202ENST00000413219 TARSL2A2RTX5 802 aaKnown RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 LRRIQ3A6PVS8 624 aaPredicted RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 H7C1D1 291 aa19.86■□□□□ 0.77
SDCBP-202ENST00000413219 WNT7AO00755 349 aa19.86■□□□□ 0.77
SDCBP-202ENST00000413219 TFRCP02786 760 aaKnown RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 NPY5RQ15761 445 aa19.86■□□□□ 0.77
SDCBP-202ENST00000413219 ENAHQ8N8S7 591 aaPredicted RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 OR8K1Q8NGG5 319 aa19.86■□□□□ 0.77
SDCBP-202ENST00000413219 ZSCAN10Q96SZ4 725 aaPredicted RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 REXO2Q9Y3B8 237 aaKnown RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 V9GY48 417 aaPredicted RBP19.86■□□□□ 0.77
SDCBP-202ENST00000413219 CDC25AP30304 524 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 NOM1Q5C9Z4 860 aaKnown RBP19.85■□□□□ 0.77
SDCBP-202ENST00000413219 WWC2Q6AWC2 1192 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 NCAPH2Q6IBW4 605 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 C10orf67Q8IYJ2 551 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 DNAJC7Q99615 494 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 DDAH1O94760 285 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 PCP11498 1178 aaKnown RBP19.85■□□□□ 0.77
SDCBP-202ENST00000413219 PAPD7Q5XG87 772 aaKnown RBP19.85■□□□□ 0.77
SDCBP-202ENST00000413219 EHBP1Q8NDI1 1231 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 PIGBQ92521 554 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 EFCC1Q9HA90 598 aa19.85■□□□□ 0.77
SDCBP-202ENST00000413219 MYH8P13535 1937 aa19.84■□□□□ 0.77
SDCBP-202ENST00000413219 PRDM1O75626 825 aa19.84■□□□□ 0.77
SDCBP-202ENST00000413219 UBXN1Q04323 297 aa19.84■□□□□ 0.77
SDCBP-202ENST00000413219 SEMA3FQ13275 785 aa19.84■□□□□ 0.77
SDCBP-202ENST00000413219 BLZF1Q9H2G9 400 aa19.84■□□□□ 0.77
SDCBP-202ENST00000413219 LGALS16A8MUM7 142 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 TRIM66O15016 1216 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 RPN1P04843 607 aaKnown RBP19.83■□□□□ 0.77
SDCBP-202ENST00000413219 CKAP4Q07065 602 aaKnown RBP19.83■□□□□ 0.77
SDCBP-202ENST00000413219 IFIT1BQ5T764 474 aaKnown RBP19.83■□□□□ 0.77
SDCBP-202ENST00000413219 ARL6IP4Q66PJ3 421 aaKnown RBP19.83■□□□□ 0.77
SDCBP-202ENST00000413219 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 ZNF34Q8IZ26 560 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 GOLGA6L1Q8N7Z2 621 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 STAMQ92783 540 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 CHP1Q99653 195 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 MTRQ99707 1265 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 LRP2BPQ9P2M1 347 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 GUCA1BQ9UMX6 200 aa19.83■□□□□ 0.77
SDCBP-202ENST00000413219 LUC7L2Q9Y383 392 aaKnown RBP19.83■□□□□ 0.77
SDCBP-202ENST00000413219 PLEKHA8P1O95397 391 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 CYP19A1P11511 503 aaPredicted RBP19.83■□□□□ 0.76
SDCBP-202ENST00000413219 EEF1GP26641 437 aaKnown RBP19.83■□□□□ 0.76
SDCBP-202ENST00000413219 KRT83P78385 493 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 TROAPQ12815 778 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 MB21D1Q8N884 522 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 CAPN11Q9UMQ6 739 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 SAR1BQ9Y6B6 198 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 DUOX1Q9NRD9 1551 aa19.83■□□□□ 0.76
SDCBP-202ENST00000413219 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.82■□□□□ 0.76
SDCBP-202ENST00000413219 TTC26A0AVF1 554 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 MINDY4BA8MYZ0 360 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 PARP1P09874 1014 aaKnown RBP19.82■□□□□ 0.76
SDCBP-202ENST00000413219 LONP1P36776 959 aaKnown RBP19.82■□□□□ 0.76
SDCBP-202ENST00000413219 TSR1Q2NL82 804 aaKnown RBP19.82■□□□□ 0.76
SDCBP-202ENST00000413219 FAM204AQ9H8W3 233 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 MYH2Q9UKX2 1941 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 VGLL3A8MV65 326 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 RNF40O75150 1001 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 FGRP09769 529 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 CYP7A1P22680 504 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 CTR9Q6PD62 1173 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 LRRC31Q6UY01 552 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 IQCA1Q86XH1 822 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 IRF2BP1Q8IU81 584 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 THAP9Q9H5L6 903 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 NUP98P52948 1817 aa19.82■□□□□ 0.76
SDCBP-202ENST00000413219 NHSL1Q5SYE7 1610 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 CNTNAP5Q8WYK1 1306 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 DLEC1Q9Y238 1755 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 PRPF6O94906 941 aaKnown RBP19.81■□□□□ 0.76
SDCBP-202ENST00000413219 PRCPP42785 496 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 BCAMP50895 628 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 MEA1Q16626 185 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 ADSSL1Q8N142 457 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 ZNF507Q8TCN5 953 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 AFAP1L1Q8TED9 768 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 RSPH14Q9UHP6 348 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 HPCAL4Q9UM19 191 aa19.81■□□□□ 0.76
SDCBP-202ENST00000413219 PDS5AQ29RF7 1337 aaKnown RBP19.81■□□□□ 0.76
SDCBP-202ENST00000413219 MAGEB6P1A0A0J9YX57 407 aa19.8■□□□□ 0.76
SDCBP-202ENST00000413219 COBLO75128 1261 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms