RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 MCM7P33993 719 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 BRD3Q15059 726 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 RMND1Q9NWS8 449 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 PUF60Q9UHX1 559 aaKnown RBP21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 TRIM14Q14142 442 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 ABHD10Q9NUJ1 306 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 LOC102724428A0A0B4J2F2 783 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 ORC4O43929 436 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 COPB1P53618 953 aaKnown RBP21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 SIK1P57059 783 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 ACRBPQ8NEB7 543 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 NUP88Q99567 741 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 FUT8Q9BYC5 575 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 VPS16Q9H269 839 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 WTIPA6NIX2 430 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 POTEB2H3BUK9 544 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 LONRF2Q1L5Z9 754 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZNF658Q5TYW1 1059 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 NELFBQ8WX92 580 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 TAB2Q9NYJ8 693 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 CALCOCO1Q9P1Z2 691 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 TAF1P21675 1872 aa21.47■■□□□ 1.03
TNFRSF8-202ENST00000413146 LRRC10BA6NIK2 292 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 NMT2O60551 498 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 PFKFB3Q16875 520 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 CYP26C1Q6V0L0 522 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 SLC35F6Q8N357 371 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZNF384Q8TF68 577 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 KCNJ18B7U540 433 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 ERVK-24P63145 666 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 KCNJ12Q14500 433 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 TCP11X2Q5H9J9 407 aa21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 BSDC1Q9NW68 430 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF8-202ENST00000413146 TUBB4BP68371 445 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 ITPK1Q13572 414 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 MTRQ99707 1265 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 CRNKL1Q9BZJ0 848 aaKnown RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 COL16A1Q07092 1604 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 CASZ1Q86V15 1759 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 RPN1P04843 607 aaKnown RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 IL17AQ16552 155 aa21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 ARL6IP4Q66PJ3 421 aaKnown RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 FAM84BQ96KN1 310 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 NAPGQ99747 312 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF8-202ENST00000413146 CALML3P27482 149 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 LONP1P36776 959 aaKnown RBP21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 ERFEQ4G0M1 354 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 ANKZF1Q9H8Y5 726 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 EVX2Q03828 476 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 DCP1AQ9NPI6 582 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 MYO1AQ9UBC5 1043 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 MINPP1Q9UNW1 487 aa21.44■■□□□ 1.02
TNFRSF8-202ENST00000413146 CDC25AP30304 524 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 KIF5BP33176 963 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 STAT6P42226 847 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 TSPY2A6NKD2 308 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 TOM1O60784 492 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 KRT9P35527 623 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 MECOMQ03112 1051 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 GPS2Q13227 327 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 SF3B3Q15393 1217 aaKnown RBP21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 HNRNPLLQ8WVV9 542 aaKnown RBP21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 ZCCHC17Q9NP64 241 aaKnown RBP21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 GDAQ9Y2T3 454 aa21.43■■□□□ 1.02
TNFRSF8-202ENST00000413146 ERLIN1O75477 346 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 UBXN1Q04323 297 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 TXLNBQ8N3L3 684 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 MSANTD4Q8NCY6 345 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 ATP8A2Q9NTI2 1148 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 MAPK8IP1Q9UQF2 711 aa21.42■■□□□ 1.02
TNFRSF8-202ENST00000413146 PRCPP42785 496 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 DDB1Q16531 1140 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 WHAMMP3Q1A5X7 153 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 WWC2Q6AWC2 1192 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 BLIDQ8IZY5 108 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 RAB21Q9UL25 225 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 H7C1D1 291 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 RNF225M0QZC1 329 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 CDCA7Q9BWT1 371 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF8-202ENST00000413146 CTAGE15A4D2H0 777 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 MAP2K7O14733 419 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 CTAGE8P0CG41 777 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 ARHGAP25P42331 645 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 USP5P45974 858 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 PIP4K2BP78356 416 aa21.4■■□□□ 1.02
TNFRSF8-202ENST00000413146 ST5P78524 1137 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms