RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 TEKQ02763 1124 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 ZNF124Q15973 351 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 RNF111Q6ZNA4 994 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 TMEM192Q8IY95 271 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 DIRC2Q96SL1 478 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 NSUN3Q9H649 340 aaKnown RBP7.91□□□□□ -1.14
HDAC9-205ENST00000411993 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
HDAC9-205ENST00000411993 PCBP3P57721 371 aaKnown RBP7.9□□□□□ -1.14
HDAC9-205ENST00000411993 SNW1Q13573 536 aaKnown RBP7.9□□□□□ -1.14
HDAC9-205ENST00000411993 ZNF654Q8IZM8 581 aa7.9□□□□□ -1.14
HDAC9-205ENST00000411993 ZNF655Q8N720 491 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-205ENST00000411993 DAGLBQ8NCG7 672 aa7.9□□□□□ -1.14
HDAC9-205ENST00000411993 MRRFQ96E11 262 aaKnown RBP7.9□□□□□ -1.14
HDAC9-205ENST00000411993 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
HDAC9-205ENST00000411993 PRAMEF1O95521 474 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 RPL10P27635 214 aaKnown RBP7.89□□□□□ -1.15
HDAC9-205ENST00000411993 RACK1P63244 317 aaKnown RBP7.89□□□□□ -1.15
HDAC9-205ENST00000411993 CHRNEQ04844 493 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 MESP2Q0VG99 397 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 SPPL2CQ8IUH8 684 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 LILRA2Q8N149 483 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 TCTN2Q96GX1 697 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 FOXP3Q9BZS1 431 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 PRDM14Q9GZV8 571 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 RNF32Q9H0A6 362 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 C19orf44Q9H6X5 657 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 ZMYM5Q9UJ78 669 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 FBXL21Q9UKT6 434 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 TCFL5Q9UL49 500 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 PPT2Q9UMR5 302 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 PCDHB12Q9Y5F1 795 aa7.89□□□□□ -1.15
HDAC9-205ENST00000411993 SIGLEC6O43699 453 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 SYPP08247 313 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 ANKS4BQ8N8V4 417 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 DHRS1Q96LJ7 313 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 EPB41L4BQ9H329 900 aa7.88□□□□□ -1.15
HDAC9-205ENST00000411993 DCP1AQ9NPI6 582 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-205ENST00000411993 MEIS1O00470 390 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 FKTNO75072 461 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 PAK2Q13177 524 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 USHBP1Q8N6Y0 703 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 FBXO15Q8NCQ5 510 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-205ENST00000411993 PPP1R16BQ96T49 567 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 TM9SF2Q99805 663 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 CHST7Q9NS84 486 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 GFOD1Q9NXC2 390 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
HDAC9-205ENST00000411993 GPR160Q9UJ42 338 aa7.87□□□□□ -1.15
HDAC9-205ENST00000411993 ACRP10323 421 aa7.86□□□□□ -1.15
HDAC9-205ENST00000411993 NR0B2Q15466 257 aa7.86□□□□□ -1.15
HDAC9-205ENST00000411993 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
HDAC9-205ENST00000411993 SYDE1Q6ZW31 735 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-205ENST00000411993 CCDC144CPQ8IYA2 1237 aa7.86□□□□□ -1.15
HDAC9-205ENST00000411993 SLC6A17Q9H1V8 727 aa7.86□□□□□ -1.15
HDAC9-205ENST00000411993 SP110Q9HB58 689 aa7.86□□□□□ -1.15
HDAC9-205ENST00000411993 JAG1P78504 1218 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 AUHQ13825 339 aaKnown RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 COL9A2Q14055 689 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 TIGD5Q53EQ6 642 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 METTL16Q86W50 562 aaKnown RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 NT5DC4Q86YG4 428 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 TAB3Q8N5C8 712 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 LINC00116Q8NCU8 138 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 BHLHE22Q8NFJ8 381 aaPredicted RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 CRBNQ96SW2 442 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 CWC22Q9HCG8 908 aaKnown RBP7.85□□□□□ -1.15
HDAC9-205ENST00000411993 MINPP1Q9UNW1 487 aa7.85□□□□□ -1.15
HDAC9-205ENST00000411993 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-205ENST00000411993 RAP1GAPP47736 663 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 PMS1P54277 932 aaKnown RBP7.84□□□□□ -1.15
HDAC9-205ENST00000411993 HDLBPQ00341 1268 aaKnown RBP7.84□□□□□ -1.15
HDAC9-205ENST00000411993 FZD5Q13467 585 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 BBS9Q3SYG4 887 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 C9orf131Q5VYM1 1079 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 TDRD10Q5VZ19 366 aaKnown RBP7.84□□□□□ -1.15
HDAC9-205ENST00000411993 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 LINC01599Q8WXQ3 324 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 GPRASP2Q96D09 838 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 SPATA32Q96LK8 384 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 G6PC3Q9BUM1 346 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 DSCC1Q9BVC3 393 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 GINM1Q9NU53 330 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 EBF1Q9UH73 591 aa7.84□□□□□ -1.15
HDAC9-205ENST00000411993 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.15
HDAC9-205ENST00000411993 GUCY2CP25092 1073 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 SLC14A2Q15849 920 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 LSRQ86X29 649 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-205ENST00000411993 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 RBBP8NLQ8NC74 664 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-205ENST00000411993 SMARCC1Q92922 1105 aaPredicted RBP7.83□□□□□ -1.16
HDAC9-205ENST00000411993 MAP6Q96JE9 813 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 EFR3BQ9Y2G0 817 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
HDAC9-205ENST00000411993 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
HDAC9-205ENST00000411993 C9IYK1 514 aa7.82□□□□□ -1.16
HDAC9-205ENST00000411993 TSPAN15O95858 294 aa7.82□□□□□ -1.16
HDAC9-205ENST00000411993 ENDOUP21128 410 aaKnown RBP7.82□□□□□ -1.16
HDAC9-205ENST00000411993 KIR2DL1P43626 348 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms