RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 MCM2P49736 904 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 NEK4P51957 841 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 RCAN1P53805 252 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 HUNKP57058 714 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 PPIL2Q13356 520 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 WTAPQ15007 396 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 TMEM67Q5HYA8 995 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
LINC02539-201ENST00000411615 GMCL1P1Q8NEA9 526 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 MAP3K14Q99558 947 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 LY9Q9HBG7 655 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 KCNH4Q9UQ05 1017 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 ZHX2Q9Y6X8 837 aa10.28□□□□□ -0.76
LINC02539-201ENST00000411615 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 NMT2O60551 498 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 USP14P54578 494 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 BACE1P56817 501 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
LINC02539-201ENST00000411615 PPP2R5BQ15173 497 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
LINC02539-201ENST00000411615 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 RGMBQ6NW40 437 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 Q6ZUG5 572 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 CHST3Q7LGC8 479 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 LPAR1Q92633 364 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 CLMNQ96JQ2 1002 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 C12orf42Q96LP6 360 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 TMEM47Q9BQJ4 181 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 ZKSCAN3Q9BRR0 538 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.77
LINC02539-201ENST00000411615 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 CLIP2Q9UDT6 1046 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 STX8Q9UNK0 236 aa10.27□□□□□ -0.77
LINC02539-201ENST00000411615 A0A1W2PRG0 241 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 RASSF10A6NK89 507 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 CALM1P0DP23 149 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 CALM2P0DP24 149 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 CALM3P0DP25 149 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 SNHG28P0DPA3 235 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 CPA1P15085 419 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 FGD1P98174 961 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 SPP2Q13103 211 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 TOB2Q14106 344 aaPredicted RBP10.26□□□□□ -0.77
LINC02539-201ENST00000411615 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 PNMA1Q8ND90 353 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 RNF166Q96A37 237 aaPredicted RBP10.26□□□□□ -0.77
LINC02539-201ENST00000411615 ZNF274Q96GC6 653 aaPredicted RBP10.26□□□□□ -0.77
LINC02539-201ENST00000411615 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 WNK4Q96J92 1243 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 VCPKMTQ9H867 229 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
LINC02539-201ENST00000411615 PTPRFP10586 1907 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 A0A0G2JLL6 359 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 F5H6K3 240 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 IRF6O14896 467 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 DDAH1O94760 285 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 SLC10A3P09131 477 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 ECE1P42892 770 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 ZNF157P51786 506 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 GTF2A2P52657 109 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 AK2P54819 239 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 INHBEP58166 350 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 KLRC3Q07444 240 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 TROAPQ12815 778 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 SNAPC2Q13487 334 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 DEFB115Q30KQ5 88 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 APOA5Q6Q788 366 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 FASTKD5Q7L8L6 764 aaKnown RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 PRRT2Q7Z6L0 340 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 ACER1Q8TDN7 264 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 BRF1Q92994 677 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 SNX21Q969T3 373 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 ZSCAN31Q96LW9 406 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 FEZ1Q99689 392 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 LRRC2Q9BYS8 371 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 RYDENQ9NUL5 291 aaKnown RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 ABT1Q9ULW3 272 aaKnown RBP10.25□□□□□ -0.77
LINC02539-201ENST00000411615 LIMCH1Q9UPQ0 1083 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 SLC12A7Q9Y666 1083 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 NID2Q14112 1375 aa10.25□□□□□ -0.77
LINC02539-201ENST00000411615 MANSC4A6NHS7 340 aaPredicted RBP10.24□□□□□ -0.77
LINC02539-201ENST00000411615 FAM155AB1AL88 458 aaPredicted RBP10.24□□□□□ -0.77
LINC02539-201ENST00000411615 PLA2G6O60733 806 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 SMARCA1P28370 1054 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 GJA5P36382 358 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 C1QTNF8P60827 252 aa10.24□□□□□ -0.77
LINC02539-201ENST00000411615 ATP2B2Q01814 1243 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms