RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PCOLCE2Q9UKZ9 415 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 ICKQ9UPZ9 632 aa0.03□□□□□ -2.4
RNU4-88P-201ENST00000411220 WDR91A4D1P6 747 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 EYA4O95677 639 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 ACRP10323 421 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 PTGER1P34995 402 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 PPP2CBP62714 309 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 PPP2CAP67775 309 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 RTL5Q5HYW3 569 aaPredicted RBP0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 COL13A1Q5TAT6 717 aaPredicted RBP0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 ARHGEF18Q6ZSZ5 1173 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 TECPR1Q7Z6L1 1165 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 SERINC5Q86VE9 423 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 CREG2Q8IUH2 290 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 KRI1Q8N9T8 703 aaKnown RBP0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 SYTL4Q96C24 671 aaPredicted RBP0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 SOX13Q9UN79 622 aa0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 PRR33A8MZF0 331 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 BACH1O14867 736 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 GPR37L1O60883 481 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 IDH3AP50213 366 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 ARSDP51689 593 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 DDR1Q08345 913 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 RAB3GAP1Q15042 981 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 TBCELQ5QJ74 424 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 C22orf34Q6ZV56 151 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 PTPN18Q99952 460 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 NRSN2Q9GZP1 204 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 ATXN3LQ9H3M9 355 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 PRDM10Q9NQV6 1147 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 SPATA6Q9NWH7 488 aaPredicted RBP0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 PPP1R9AQ9ULJ8 1098 aa0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 FNDC3AQ9Y2H6 1198 aaKnown RBP0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 POLR2AP24928 1970 aaKnown RBP0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 NOTOA8MTQ0 251 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 RNGTTO60942 597 aaKnown RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 XYLBO75191 536 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 KIF4AO95239 1232 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 BAG4O95429 457 aaKnown RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 EFEMP2O95967 443 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 COL2A1P02458 1487 aaPredicted RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 PNLIPP16233 465 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 DNAJA1P31689 397 aaKnown RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 GJA4P35212 333 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 ZNF200P98182 395 aaPredicted RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 GSTM4Q03013 218 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 DUSP4Q13115 394 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 GRM2Q14416 872 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 LCORQ96JN0 433 aaPredicted RBP0□□□□□ -2.41
RNU4-88P-201ENST00000411220 ZFYVE1Q9HBF4 777 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 BCS1LQ9Y276 419 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 CHMP3Q9Y3E7 222 aa0□□□□□ -2.41
RNU4-88P-201ENST00000411220 SYNGAP1Q96PV0 1343 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 ATF2P15336 505 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 COMTP21964 271 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 MAOBP27338 520 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 POLGP54098 1239 aaPredicted RBP-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 AGBL4Q5VU57 503 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 PDPRQ8NCN5 879 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 ZNF703Q9H7S9 590 aaPredicted RBP-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 CAPN6Q9Y6Q1 641 aa-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 COL11A2P13942 1736 aaPredicted RBP-0.01□□□□□ -2.41
RNU4-88P-201ENST00000411220 NOTCH1P46531 2555 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 TMPRSS2O15393 492 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 FOXS1O43638 330 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 EOMESO95936 686 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 CTSBP07858 339 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 FBXO45P0C2W1 286 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 ACRV1P26436 265 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 ELLP55199 621 aaPredicted RBP-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 PSMA6P60900 246 aaKnown RBP-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 EGR3Q06889 387 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 MAP2K5Q13163 448 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 TUSC1Q2TAM9 212 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 C9orf131Q5VYM1 1079 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 POTEAQ6S8J7 498 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 MTMR14Q8NCE2 650 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 OR13H1Q8NG92 308 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 EPS8L1Q8TE68 723 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 MEGF9Q9H1U4 602 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 DOLKQ9UPQ8 538 aa-0.02□□□□□ -2.41
RNU4-88P-201ENST00000411220 DSTQ03001 7570 aaKnown RBP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 NUDT19A8MXV4 375 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 ZNF185O15231 689 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 RBMXL2O75526 392 aaKnown RBP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 PEX11BO96011 259 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 HCLS1P14317 486 aaPredicted RBP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 CYP7A1P22680 504 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 CXCR3P49682 368 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 FGD1P98174 961 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 VAC14Q08AM6 782 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 MST1LQ2TV78 715 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 MCTP2Q6DN12 878 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 TCTN3Q6NUS6 607 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 PHF6Q8IWS0 365 aaKnown RBP eCLIP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 ALDH16A1Q8IZ83 802 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 FAM98AQ8NCA5 519 aaKnown RBP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 WIPF2Q8TF74 440 aaPredicted RBP-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 FANCD2OSQ96PS1 177 aa-0.03□□□□□ -2.41
RNU4-88P-201ENST00000411220 CCDC9Q9Y3X0 531 aaKnown RBP-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms