RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 KCNH4Q9UQ05 1017 aa11.77□□□□□ -0.53
RN7SKP54-201ENST00000410704 MYH4Q9Y623 1939 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 CPLX1O14810 134 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 CETPP11597 493 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 BMP3P12645 472 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCT2P78371 535 aaKnown RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 ZNF543Q08ER8 600 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 NID2Q14112 1375 aa11.76□□□□□ -0.53
RN7SKP54-201ENST00000410704 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 CDKL5O76039 1030 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 LARGE1O95461 756 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 SLC10A3P09131 477 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 GOLGA8HP0CJ92 632 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 VCAM1P19320 739 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 GJA5P36382 358 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 SCRN1Q12765 414 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 PABPC4Q13310 644 aaKnown RBP eCLIP11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 KCTD1Q719H9 257 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
RN7SKP54-201ENST00000410704 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 MANSC4A6NHS7 340 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 DGKZQ13574 1117 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 DEFB115Q30KQ5 88 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 KIAA1755Q5JYT7 1200 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 MAD2L2Q9UI95 211 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 FEM1BQ9UK73 627 aa11.74□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 SMARCA1P28370 1054 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 CDC27P30260 824 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 STAT2P52630 851 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 AKAP17AQ02040 695 aaKnown RBP11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 GRM1Q13255 1194 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCL15Q16663 113 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 STAG2Q8N3U4 1231 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 LLPHQ9BRT6 129 aaKnown RBP11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 AGTPBP1Q9UPW5 1226 aa11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.73□□□□□ -0.53
RN7SKP54-201ENST00000410704 PLA2G6O60733 806 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 FLOT1O75955 427 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 PLEKHA8P1O95397 391 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 IFNAR1P17181 557 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 OSBPP22059 807 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SLC16A2P36021 539 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 INHBEP58166 350 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 IRX3P78415 501 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SREBF2Q12772 1141 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 NOGQ13253 232 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 CUL4AQ13619 759 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 KIFC2Q96AC6 838 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms