RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 GOLGA5Q8TBA6 731 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 RNF26Q9BY78 433 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-208ENST00000410007 CCPG1Q9ULG6 757 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 RGS12O14924 1447 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 H7C1W4 665 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 KCNQ4P56696 695 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 YWHAEP62258 255 aaKnown RBP10.09□□□□□ -0.79
PBRM1-208ENST00000410007 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 TTC14Q96N46 770 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 DBNDD1Q9H9R9 158 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 AGTPBP1Q9UPW5 1226 aa10.09□□□□□ -0.79
PBRM1-208ENST00000410007 P4HA1P13674 534 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 PFKFB1P16118 471 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CCNA1P78396 465 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CEP128Q6ZU80 1094 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 RTKN2Q8IZC4 609 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 MYOCDQ8IZQ8 938 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 KRT222Q8N1A0 295 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 UBL4BQ8N7F7 174 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 STAMQ92783 540 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 USP28Q96RU2 1077 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 RBSNQ9H1K0 784 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 LARSQ9P2J5 1176 aaKnown RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 BTBD18B2RXH4 712 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CMA1P23946 247 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 ZNF75DP51815 510 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 C6orf163Q5TEZ5 329 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TTLL11Q8NHH1 800 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 BLZF1Q9H2G9 400 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 LMBRD1Q9NUN5 540 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 DDX25Q9UHL0 483 aaKnown RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 MTMR6Q9Y217 621 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 FAM169AQ9Y6X4 670 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 GADD45BO75293 160 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 GAS8O95995 478 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CD19P15391 556 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TECP42680 631 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 MRPS9P82933 396 aaKnown RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 SUSD4Q5VX71 490 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 ARFGAP2Q8N6H7 521 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 GPKOWQ92917 476 aaPredicted RBP eCLIP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 RNF34Q969K3 372 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 COA1Q9GZY4 146 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 hCG_1984214I3L0E3 225 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 ARHGAP6O43182 974 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 ADRA2BP18089 450 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 MAGEA1P43355 309 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TMED8Q6PL24 325 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 APOA5Q6Q788 366 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 ZNF713Q8N859 430 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TRIML1Q8N9V2 468 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 NAPGQ99747 312 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-208ENST00000410007 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 TRPC6Q9Y210 931 aa10.08□□□□□ -0.8
PBRM1-208ENST00000410007 CYP21A2P08686 494 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 MMP10P09238 476 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 LONP1P36776 959 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 NCAPG2Q86XI2 1143 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 MASTLQ96GX5 879 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 COL4A3BPQ9Y5P4 624 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 TNS3Q68CZ2 1445 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 KRT19P08727 400 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 TNNI1P19237 187 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 KCTD2Q14681 263 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 DALRD3Q5D0E6 543 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 IFT81Q8WYA0 676 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 NARFQ9UHQ1 456 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 LAD1O00515 517 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 PRPF6O94906 941 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 ARL1P40616 181 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 DYNLL1P63167 89 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 MAGEF1Q9HAY2 307 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 CTTNBP2NLQ9P2B4 639 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 XRCC5P13010 732 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 POLA2Q14181 598 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 FAM102BQ5T8I3 360 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 SFMBT2Q5VUG0 894 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 DCUN1D2Q6PH85 259 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 SECISBP2LQ93073 1101 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 PAIP2Q9BPZ3 127 aaKnown RBP10.07□□□□□ -0.8
PBRM1-208ENST00000410007 ANTXR1Q9H6X2 564 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 NRBP2Q9NSY0 501 aa10.07□□□□□ -0.8
PBRM1-208ENST00000410007 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
PBRM1-208ENST00000410007 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms