RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 CNGA4Q8IV77 575 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 ITIH6Q6UXX5 1313 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 KIF5CO60282 957 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 CYP2C19P33261 490 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 TXLNAP40222 546 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 NLRP5P59047 1200 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 FAM47AQ5JRC9 791 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 ZNF569Q5MCW4 686 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 ARFGAP3Q9NP61 516 aa17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 LIMA1Q9UHB6 759 aaKnown RBP17.16■□□□□ 0.34
LYSMD4-204ENST00000409796 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 FECHP22830 423 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 MCM7P33993 719 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 ERFEQ4G0M1 354 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 ACRBPQ8NEB7 543 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 VPS16Q9H269 839 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 RNF225M0QZC1 329 aaPredicted RBP17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 N4BP3O15049 544 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 SCG2P13521 617 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 CDC23Q9UJX2 597 aa17.15■□□□□ 0.34
LYSMD4-204ENST00000409796 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 CDC25AP30304 524 aa17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 ERVK-24P63145 666 aa17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 FUT8Q9BYC5 575 aa17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 RWDD2AQ9UIY3 292 aa17.14■□□□□ 0.34
LYSMD4-204ENST00000409796 LAMB1P07942 1786 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 ORC4O43929 436 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 ABL1P00519 1130 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 OAS2P29728 719 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 COPB1P53618 953 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 LRRC10BA6NIK2 292 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 CYP2D6P10635 497 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 PAK1Q13153 545 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 SLC35F6Q8N357 371 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 NELFBQ8WX92 580 aa17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 ZCCHC17Q9NP64 241 aaKnown RBP17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.33
LYSMD4-204ENST00000409796 KLRK1P26718 216 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 TRAPPC10P48553 1259 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 HNRNPH2P55795 449 aaKnown RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 PFKFB3Q16875 520 aaPredicted RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 KIF4BQ2VIQ3 1234 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 NSUN4Q96CB9 384 aaKnown RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 ABHD10Q9NUJ1 306 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 COL16A1Q07092 1604 aaPredicted RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 MECOMQ03112 1051 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 TMTC1Q8IUR5 882 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
LYSMD4-204ENST00000409796 KCNJ18B7U540 433 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 KCNJ12Q14500 433 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 LONRF2Q1L5Z9 754 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 TCP11X2Q5H9J9 407 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 ZNF658Q5TYW1 1059 aaPredicted RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 MAPK8IP1Q9UQF2 711 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 CCDC151A5D8V7 595 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 RPN1P04843 607 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 SPAG1Q07617 926 aa17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 PYM1Q9BRP8 204 aaKnown RBP17.12■□□□□ 0.33
LYSMD4-204ENST00000409796 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 BRD3Q15059 726 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 ARHGAP25P42331 645 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 PRCPP42785 496 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 DDB1Q16531 1140 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 CRNKL1Q9BZJ0 848 aaKnown RBP17.11■□□□□ 0.33
LYSMD4-204ENST00000409796 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 ST5P78524 1137 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 RCSD1Q6JBY9 416 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
LYSMD4-204ENST00000409796 KRT9P35527 623 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms