RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 CDC25BP30305 580 aa22.12■■□□□ 1.13
LIMS2-204ENST00000409286 ATP2C1P98194 919 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 MDM2Q00987 491 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 NOM1Q5C9Z4 860 aaKnown RBP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 SPECC1Q5M775 1068 aa22.12■■□□□ 1.13
LIMS2-204ENST00000409286 METTL16Q86W50 562 aaKnown RBP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 IDI2Q9BXS1 227 aa22.12■■□□□ 1.13
LIMS2-204ENST00000409286 DHX36Q9H2U1 1008 aaKnown RBP22.12■■□□□ 1.13
LIMS2-204ENST00000409286 A0A087WWV3 80 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 M0R2N6 131 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 GOLGA8HP0CJ92 632 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 SHMT1P34896 483 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 DPCR1Q3MIW9 517 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 KIAA0825Q8IV33 1275 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 CCDC12Q8WUD4 166 aaPredicted RBP22.11■■□□□ 1.13
LIMS2-204ENST00000409286 RRP36Q96EU6 259 aaKnown RBP22.11■■□□□ 1.13
LIMS2-204ENST00000409286 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 BAZ2BQ9UIF8 2168 aaKnown RBP22.11■■□□□ 1.13
LIMS2-204ENST00000409286 POLR2DO15514 142 aaKnown RBP22.11■■□□□ 1.13
LIMS2-204ENST00000409286 PNOCQ13519 176 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 AOC3Q16853 763 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 USP17L2Q6R6M4 530 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 HEATR3Q7Z4Q2 680 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 AOPEPQ8N6M6 819 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 CCDC17Q96LX7 622 aa22.11■■□□□ 1.13
LIMS2-204ENST00000409286 SMTNL1A8MU46 457 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 TTLL1O95922 423 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 NFIAQ12857 509 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 PTGDRQ13258 359 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 ASPRV1Q53RT3 343 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 TYW1BQ6NUM6 668 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 CCDC34Q96HJ3 373 aa22.1■■□□□ 1.13
LIMS2-204ENST00000409286 USP17L5A8MUK1 530 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 BIN1O00499 593 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 WNT7AO00755 349 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 SNHG28P0DPA3 235 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 PDHBP11177 359 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 MRFAP1L1Q96HT8 127 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 RIOX1Q9H6W3 641 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 SERTAD1Q9UHV2 236 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 PCDHA6Q9UN73 950 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 PCDHA8Q9Y5H6 950 aa22.09■■□□□ 1.13
LIMS2-204ENST00000409286 hCG_1984214I3L0E3 225 aa22.08■■□□□ 1.13
LIMS2-204ENST00000409286 RBM5P52756 815 aaKnown RBP eCLIP22.08■■□□□ 1.13
LIMS2-204ENST00000409286 ARL6IP4Q66PJ3 421 aaKnown RBP22.08■■□□□ 1.13
LIMS2-204ENST00000409286 ZNF713Q8N859 430 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-204ENST00000409286 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.13
LIMS2-204ENST00000409286 ZMYND12Q9H0C1 365 aa22.08■■□□□ 1.13
LIMS2-204ENST00000409286 SEC63Q9UGP8 760 aaKnown RBP22.08■■□□□ 1.13
LIMS2-204ENST00000409286 CCDC194A0A1B0GVG4 234 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 IKBKBO14920 756 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 ADAMTS3O15072 1205 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 ACTN4O43707 911 aaKnown RBP22.07■■□□□ 1.12
LIMS2-204ENST00000409286 TPM4P67936 248 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 POSTNQ15063 836 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 NT5DC1Q5TFE4 455 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 FOXP4Q8IVH2 680 aaPredicted RBP22.07■■□□□ 1.12
LIMS2-204ENST00000409286 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 TTLL6Q8N841 843 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 SPC24Q8NBT2 197 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 CLIP2Q9UDT6 1046 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 PCDHA5Q9Y5H7 936 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 PPIP5K2O43314 1243 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 C21orf2O43822 256 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 USP49Q70CQ1 688 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 ZFPM1Q8IX07 1006 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 PYM1Q9BRP8 204 aaKnown RBP22.07■■□□□ 1.12
LIMS2-204ENST00000409286 C6orf50Q9HD87 102 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 PI4KBQ9UBF8 816 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 FAM198AQ9UFP1 575 aa22.07■■□□□ 1.12
LIMS2-204ENST00000409286 GNA11P29992 359 aa22.06■■□□□ 1.12
LIMS2-204ENST00000409286 CCDC93Q567U6 631 aa22.06■■□□□ 1.12
LIMS2-204ENST00000409286 DRC7Q8IY82 874 aa22.06■■□□□ 1.12
LIMS2-204ENST00000409286 C4orf32Q8N8J7 132 aa22.06■■□□□ 1.12
LIMS2-204ENST00000409286 SYMPKQ92797 1274 aaKnown RBP22.06■■□□□ 1.12
LIMS2-204ENST00000409286 SCN9AQ15858 1988 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 MCM7P33993 719 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 SARSP49591 514 aaKnown RBP22.05■■□□□ 1.12
LIMS2-204ENST00000409286 NAPAP54920 295 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 RASGRP2Q7LDG7 609 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 KRT25Q7Z3Z0 450 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 EPSTI1Q96J88 318 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 ZNF830Q96NB3 372 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-204ENST00000409286 PSMD1Q99460 953 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 TTC12Q9H892 705 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-204ENST00000409286 ADAMTSL1Q8N6G6 1762 aa22.05■■□□□ 1.12
LIMS2-204ENST00000409286 ZNF646O15015 1829 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-204ENST00000409286 ESYT2A0FGR8 921 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 SLFN14P0C7P3 912 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 LRRC47Q8N1G4 583 aaKnown RBP22.04■■□□□ 1.12
LIMS2-204ENST00000409286 TRIML1Q8N9V2 468 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 SMARCE1Q969G3 411 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 PIGSQ96S52 555 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 CPVLQ9H3G5 476 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 PCDHAC2Q9Y5I4 1007 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 VWA3AA6NCI4 1184 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 SMCO2A6NFE2 343 aa22.04■■□□□ 1.12
LIMS2-204ENST00000409286 FOXN1O15353 648 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms