RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 HOOK2Q96ED9 719 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 RRAGDQ9NQL2 400 aaPredicted RBP14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 GABRQQ9UN88 632 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 MAGEB6P1A0A0J9YX57 407 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 ADCY3O60266 1144 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 APPP05067 770 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 PLCG2P16885 1265 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 PPATQ06203 517 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 DCAF15Q66K64 600 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 ANKRD23Q86SG2 305 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 FERMT3Q86UX7 667 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 MB21D2Q8IYB1 491 aaPredicted RBP14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 DEFB118Q96PH6 123 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 KRT23Q9C075 422 aa14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 PUS7LQ9H0K6 701 aaKnown RBP14.93□□□□□ -0.02
SMARCB1-203ENST00000407082 JAK2O60674 1132 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 ELNP15502 786 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 INPP5BP32019 993 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 RHBDL3P58872 404 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 BRAPQ7Z569 592 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 BICD2Q8TD16 824 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 SH3RF3Q8TEJ3 882 aaPredicted RBP14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 DDX11Q96FC9 970 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 ZNF341Q9BYN7 854 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 LRRC2Q9BYS8 371 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 TNMDQ9H2S6 317 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 RCOR1Q9UKL0 485 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 ZMYND8Q9ULU4 1186 aaPredicted RBP14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 NOL7Q9UMY1 257 aaKnown RBP14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 MAST2Q6P0Q8 1798 aa14.92□□□□□ -0.02
SMARCB1-203ENST00000407082 KLF18A0A0U1RQI7 1052 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 GOLGA6L6A8MZA4 724 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 CYP2C8P10632 490 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 CCT2P78371 535 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 C7orf61Q8IZ16 206 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 NAPBQ9H115 298 aa14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
SMARCB1-203ENST00000407082 MBD4O95243 580 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 INHAP05111 366 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 FKBP1CQ5VVH2 108 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 CCDC73Q6ZRK6 1079 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 RNF214Q8ND24 703 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 WASF1Q92558 559 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 PARK7Q99497 189 aaKnown RBP14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 ARMT1Q9H993 441 aa14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 TFIP11Q9UBB9 837 aaKnown RBP14.9□□□□□ -0.02
SMARCB1-203ENST00000407082 GOLGA8BA8MQT2 603 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 LIFRP42702 1097 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 FLT3LGP49771 235 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 HAND2P61296 217 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 TCP10Q12799 353 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 NFIAQ12857 509 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 PICALMQ13492 652 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 LCORLQ8N3X6 602 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 TGFBRAP1Q8WUH2 860 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 FUCA2Q9BTY2 467 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 FAM198AQ9UFP1 575 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 STXBP5LQ9Y2K9 1186 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 COL6A3P12111 3177 aa14.89□□□□□ -0.03
SMARCB1-203ENST00000407082 ERICH2A1L162 156 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 ZNF500O60304 480 aaPredicted RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 KDM4AO75164 1064 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 SYN1P17600 705 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 USP5P45974 858 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 NT5C2P49902 561 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 RCAN1P53805 252 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 PPP2R5BQ15173 497 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 RBM43Q6ZSC3 357 aaKnown RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 NECAB2Q7Z6G3 386 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 FAM83AQ86UY5 434 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 FAM200AQ8TCP9 573 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 DIS3LQ8TF46 1054 aaKnown RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 COL25A1Q9BXS0 654 aaPredicted RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 DDX4Q9NQI0 724 aaKnown RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 ORC3Q9UBD5 711 aaPredicted RBP14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 ZKSCAN5Q9Y2L8 839 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 ADGRA2Q96PE1 1338 aa14.88□□□□□ -0.03
SMARCB1-203ENST00000407082 CCDC196A0A1B0GTZ2 297 aa14.87□□□□□ -0.03
SMARCB1-203ENST00000407082 TNPO2O14787 897 aaKnown RBP14.87□□□□□ -0.03
SMARCB1-203ENST00000407082 ENTPD3O75355 529 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms