RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 CASP14P31944 242 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 BTDP43251 543 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 RBL2Q08999 1139 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 MFSD14BQ5SR56 506 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 KRT222Q8N1A0 295 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 EYA3Q99504 573 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 ZHX3Q9H4I2 956 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 RMND1Q9NWS8 449 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCNX4-204ENST00000406949 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 GDAQ9Y2T3 454 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
PCNX4-204ENST00000406949 MTIF2P46199 727 aaKnown RBP13.43□□□□□ -0.26
PCNX4-204ENST00000406949 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
PCNX4-204ENST00000406949 FEZ1Q99689 392 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
PCNX4-204ENST00000406949 CNTNAP5Q8WYK1 1306 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 PCP11498 1178 aaKnown RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 ERCC5P28715 1186 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 ST5P78524 1137 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 USP17L2Q6R6M4 530 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 GSDMAQ96QA5 445 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 TRIM34Q9BYJ4 488 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 EPC1Q9H2F5 836 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 GPCPD1Q9NPB8 672 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 ANAPC4Q9UJX5 808 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 RCAN1P53805 252 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 KMT5BQ4FZB7 885 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 IRX2Q9BZI1 471 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 PSMA7O14818 248 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 STX10O60499 249 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 KRT9P35527 623 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 SMAP1Q8IYB5 467 aaPredicted RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 LRRN4CLQ8ND94 238 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
PCNX4-204ENST00000406949 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 EXOC1Q9NV70 894 aa13.42□□□□□ -0.26
PCNX4-204ENST00000406949 MYO1BO43795 1136 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 RPN1P04843 607 aaKnown RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 TXKP42681 527 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 TNNI2P48788 182 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 KIAA1328Q86T90 577 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 PYM1Q9BRP8 204 aaKnown RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
PCNX4-204ENST00000406949 SLF1Q9BQI6 1058 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 GLI3P10071 1580 aa13.41□□□□□ -0.26
PCNX4-204ENST00000406949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 KCNJ18B7U540 433 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 GTF2IP78347 998 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 SPAG1Q07617 926 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 CNGA4Q8IV77 575 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 LRRC47Q8N1G4 583 aaKnown RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 GUCA1BQ9UMX6 200 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 PCDHA4Q9UN74 947 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 GTPBP6O43824 516 aaPredicted RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 ORC4O43929 436 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 WDR24Q96S15 920 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 HSD3B7Q9H2F3 369 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 TECP42680 631 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.26
PCNX4-204ENST00000406949 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 XDHP47989 1333 aa13.4□□□□□ -0.26
PCNX4-204ENST00000406949 MDM2Q00987 491 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-204ENST00000406949 PDE4DQ08499 809 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 ACRBPQ8NEB7 543 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 TUBB4AP04350 444 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 NAP1L1P55209 391 aaKnown RBP13.39□□□□□ -0.27
PCNX4-204ENST00000406949 GRAPQ13588 217 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 KRT31Q15323 416 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
PCNX4-204ENST00000406949 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
PCNX4-204ENST00000406949 MYO5AQ9Y4I1 1855 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms