RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 TACC3Q9Y6A5 838 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 TRIM43BA6NCK2 446 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 IGHA2P01877 340 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 AKR1B1P15121 316 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 SMAD3P84022 425 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 TLE2Q04725 743 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 CLEC10AQ8IUN9 316 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 MYLIPQ8WY64 445 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 TRIM43Q96BQ3 446 aaPredicted RBP25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 VCPKMTQ9H867 229 aa25.36■■□□□ 1.65
RHBDD3-202ENST00000406335 WDR46O15213 610 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-202ENST00000406335 RAG1P15918 1043 aa25.35■■□□□ 1.65
RHBDD3-202ENST00000406335 RNPC3Q96LT9 517 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-202ENST00000406335 CCDC17Q96LX7 622 aa25.35■■□□□ 1.65
RHBDD3-202ENST00000406335 PGK1P00558 417 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 PGK2P07205 417 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 CLTBP09497 229 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 FOSL2P15408 326 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 TMEM132BQ14DG7 1078 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 SNX17Q15036 470 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 ATP8A2Q9NTI2 1148 aa25.34■■□□□ 1.65
RHBDD3-202ENST00000406335 PRKAB2O43741 272 aa25.33■■□□□ 1.65
RHBDD3-202ENST00000406335 SMARCA5O60264 1052 aaPredicted RBP25.33■■□□□ 1.65
RHBDD3-202ENST00000406335 PQBP1O60828 265 aaKnown RBP25.33■■□□□ 1.65
RHBDD3-202ENST00000406335 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.33■■□□□ 1.65
RHBDD3-202ENST00000406335 NRBP1Q9UHY1 535 aa25.33■■□□□ 1.65
RHBDD3-202ENST00000406335 MBD4O95243 580 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 STAT3P40763 770 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 C1orf53Q5VUE5 145 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 TINF2Q9BSI4 451 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 GOPCQ9HD26 462 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 TMEM39AQ9NV64 488 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 PHF24Q9UPV7 400 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 CNPY2Q9Y2B0 182 aa25.32■■□□□ 1.64
RHBDD3-202ENST00000406335 TCRBV5S4A2TA0A5A2 114 aa25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 EEF2P13639 858 aaKnown RBP25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 SLC4A3P48751 1232 aa25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 CDK8P49336 464 aa25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 SIAH1Q8IUQ4 282 aa25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 NAV1Q8NEY1 1877 aa25.31■■□□□ 1.64
RHBDD3-202ENST00000406335 AKR1A1P14550 325 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 RIOX2Q8IUF8 465 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 LRRCC1Q9C099 1032 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 TTYH1Q9H313 450 aaPredicted RBP25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 BOLA2Q9H3K6 86 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 KANSL2Q9H9L4 492 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 PAG1Q9NWQ8 432 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 CTDP1Q9Y5B0 961 aaPredicted RBP25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 PCDHB15Q9Y5E8 787 aa25.3■■□□□ 1.64
RHBDD3-202ENST00000406335 BAZ2AQ9UIF9 1905 aaKnown RBP25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 CYP2D7A0A087X1C5 515 aa25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 USP17L12C9JPN9 530 aa25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 USP17L21D6R901 530 aa25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 FPGSQ05932 587 aa25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 FBXO28Q9NVF7 368 aa25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 DIS3Q9Y2L1 958 aaKnown RBP25.29■■□□□ 1.64
RHBDD3-202ENST00000406335 A0A1W2PQ45 241 aaPredicted RBP25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 A0A1W2PQY0 241 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 DCDC2CA8MYV0 355 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 TAL1P17542 331 aaPredicted RBP25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 COPB2P35606 906 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 C12orf60Q5U649 245 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 NUP133Q8WUM0 1156 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 DDX11Q96FC9 970 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 CRBNQ96SW2 442 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 DCTPP1Q9H773 170 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 STARD7Q9NQZ5 370 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 SLC4A4Q9Y6R1 1079 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 FRMPD3Q5JV73 1810 aa25.28■■□□□ 1.64
RHBDD3-202ENST00000406335 VWA5AO00534 786 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 ITGB8P26012 769 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 ADD2P35612 726 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 ZNF792Q3KQV3 632 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 SLFNL1Q499Z3 407 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 FAM83BQ5T0W9 1011 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 VTI1AQ96AJ9 217 aa25.27■■□□□ 1.64
RHBDD3-202ENST00000406335 MYH8P13535 1937 aa25.26■■□□□ 1.63
RHBDD3-202ENST00000406335 SYMPKQ92797 1274 aaKnown RBP25.26■■□□□ 1.63
RHBDD3-202ENST00000406335 FAM184BQ9ULE4 1060 aa25.26■■□□□ 1.63
RHBDD3-202ENST00000406335 PPP1R9AQ9ULJ8 1098 aa25.26■■□□□ 1.63
RHBDD3-202ENST00000406335 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 KIAA0355O15063 1070 aa25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 ATP5JP18859 108 aa25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 C16orf86Q6ZW13 317 aa25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 LENG1Q96BZ8 264 aaPredicted RBP25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 ZHX1Q9UKY1 873 aaPredicted RBP25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 ADAMTS5Q9UNA0 930 aa25.25■■□□□ 1.63
RHBDD3-202ENST00000406335 ZNF865P0CJ78 1059 aaPredicted RBP25.24■■□□□ 1.63
RHBDD3-202ENST00000406335 EPHB4P54760 987 aa25.24■■□□□ 1.63
RHBDD3-202ENST00000406335 STK11IPQ8N1F8 1099 aa25.24■■□□□ 1.63
RHBDD3-202ENST00000406335 TSEN34Q9BSV6 310 aaKnown RBP25.24■■□□□ 1.63
RHBDD3-202ENST00000406335 DNAH12Q6ZR08 3092 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 TMEM265A0A087WTH1 108 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 SMIM22K7EJ46 135 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 ACLYP53396 1101 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 ZSCAN25Q6NSZ9 544 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
RHBDD3-202ENST00000406335 ZNF236Q9UL36 1845 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms