RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 DYNLL2Q96FJ2 89 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 C8orf37Q96NL8 207 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 RIOK1Q9BRS2 568 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 VPS16Q9H269 839 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 BSDC1Q9NW68 430 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 NWD2Q9ULI1 1742 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 TMEM139Q8IV31 216 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 CTNND2Q9UQB3 1225 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 SEC23AQ15436 765 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
ATG4B-206ENST00000405546 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 EHD4Q9H223 541 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 MYO5AQ9Y4I1 1855 aaKnown RBP16.94■□□□□ 0.3
ATG4B-206ENST00000405546 A0A087X0B3 334 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-206ENST00000405546 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 ACRBPQ8NEB7 543 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-206ENST00000405546 KCND1Q9NSA2 647 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 TFR2Q9UP52 801 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 N4BP3O15049 544 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 PKN1Q16512 942 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 LINC00116Q8NCU8 138 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 PAGE5Q96GU1 130 aa16.94■□□□□ 0.3
ATG4B-206ENST00000405546 NUP188Q5SRE5 1749 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-206ENST00000405546 DIXDC1Q155Q3 683 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 BEND6Q5SZJ8 279 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-206ENST00000405546 LRRC31Q6UY01 552 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 HEATR3Q7Z4Q2 680 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 NOA1Q8NC60 698 aaKnown RBP16.93■□□□□ 0.3
ATG4B-206ENST00000405546 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-206ENST00000405546 ABCC6O95255 1503 aa16.93■□□□□ 0.3
ATG4B-206ENST00000405546 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 TROAPQ12815 778 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 HDXQ7Z353 690 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 ZNF444Q8N0Y2 327 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 ATRNO75882 1429 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 LRRIQ3A6PVS8 624 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 ENC1O14682 589 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CALM1P0DP23 149 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CALM2P0DP24 149 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CALM3P0DP25 149 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 MORC3Q14149 939 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CASP8Q14790 479 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 AMOTL1Q8IY63 956 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 SLC35F6Q8N357 371 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 NSUN4Q96CB9 384 aaKnown RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CAPZA3Q96KX2 299 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-206ENST00000405546 CCDC151A5D8V7 595 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 RAD21O60216 631 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 PLCD1P51178 756 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 IQUBQ8NA54 791 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 DEF6Q9H4E7 631 aa16.92■□□□□ 0.3
ATG4B-206ENST00000405546 AKR1B15C9JRZ8 316 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-206ENST00000405546 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 SCG2P13521 617 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 RAD9BQ6WBX8 426 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 SHISA4Q96DD7 197 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-206ENST00000405546 AKAP11Q9UKA4 1901 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 KDM4FA0A1W2PPD8 638 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 USP17L3A6NCW0 530 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 USP17L4A6NCW7 530 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
ATG4B-206ENST00000405546 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 USP17L1Q7RTZ2 530 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 PHF20Q9BVI0 1012 aa16.91■□□□□ 0.3
ATG4B-206ENST00000405546 RBL2Q08999 1139 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 MAGEA9P43362 315 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
ATG4B-206ENST00000405546 TAB2Q9NYJ8 693 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 KIF5BP33176 963 aa16.9■□□□□ 0.3
ATG4B-206ENST00000405546 STAT6P42226 847 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms