RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 CCL15Q16663 113 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 FAM47AQ5JRC9 791 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 NFXL1Q6ZNB6 911 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 RUFY3Q7L099 469 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 ANKRD23Q86SG2 305 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 MB21D2Q8IYB1 491 aaPredicted RBP9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 DCAF4Q8WV16 495 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 GMCL1Q96IK5 515 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 CLMNQ96JQ2 1002 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 LZTS2Q9BRK4 669 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 VCPKMTQ9H867 229 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 SAGE1Q9NXZ1 904 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 AGTPBP1Q9UPW5 1226 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 SNX14Q9Y5W7 946 aa9.8□□□□□ -0.84
SNRPD3-203ENST00000404603 TESPA1A2RU30 521 aaPredicted RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 DHX16O60231 1041 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 DDAH1O94760 285 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 RPS6KB1P23443 525 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 SLC1A4P43007 532 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 TM4SF4P48230 202 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 IRX3P78415 501 aaPredicted RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 ARHGEF6Q15052 776 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 ASPRV1Q53RT3 343 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 CPLX2Q6PUV4 134 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 FAM160B2Q86V87 743 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 MB21D1Q8N884 522 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 PNMA1Q8ND90 353 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 CTCFLQ8NI51 663 aaPredicted RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 CHURC1Q8WUH1 139 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 ZSWIM6Q9HCJ5 1215 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 RBM28Q9NW13 759 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 HOXC10Q9NYD6 342 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 SLC12A7Q9Y666 1083 aa9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 GREB1LQ9C091 1923 aaPredicted RBP9.79□□□□□ -0.84
SNRPD3-203ENST00000404603 F5H6K3 240 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 RAD21O60216 631 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 PLA2G6O60733 806 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 HOXA7P31268 230 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 COPB2P35606 906 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 GCLCP48506 637 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 STAT2P52630 851 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 HMGCS2P54868 508 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 KLRC3Q07444 240 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 CYP4F22Q6NT55 531 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 GADL1Q6ZQY3 521 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 ENAHQ8N8S7 591 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 TBC1D32Q96NH3 1257 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 ALDH8A1Q9H2A2 487 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 RBM27Q9P2N5 1060 aaKnown RBP9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 FEM1BQ9UK73 627 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 FZD1Q9UP38 647 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 THSD7BQ9C0I4 1608 aa9.78□□□□□ -0.84
SNRPD3-203ENST00000404603 FAM155AB1AL88 458 aaPredicted RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 SH2B2O14492 632 aaPredicted RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 CDKL5O76039 1030 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 BMP3P12645 472 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 VCAM1P19320 739 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 GUCY1A2P33402 732 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 EMP3P54852 163 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 IKQ13123 557 aaPredicted RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 GRM1Q13255 1194 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 TMEM47Q9BQJ4 181 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 TANGO6Q9C0B7 1094 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 IL17RBQ9NRM6 502 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 PDRG1Q9NUG6 133 aa9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 ISY1Q9ULR0 285 aaKnown RBP9.77□□□□□ -0.85
SNRPD3-203ENST00000404603 LOC285556D6RIA3 1793 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 SMARCA1P28370 1054 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 VEGFBP49765 207 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 CCNA1P78396 465 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 EXOSC10Q01780 885 aaKnown RBP9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 KIF23Q02241 960 aaPredicted RBP9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 COG2Q14746 738 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 SEC23AQ15436 765 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 CCDC96Q2M329 555 aa9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 NOM1Q5C9Z4 860 aaKnown RBP9.76□□□□□ -0.85
SNRPD3-203ENST00000404603 SLFN13Q68D06 897 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms