RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 TTC14Q96N46 770 aa17.17■□□□□ 0.34
CDPF1-203ENST00000404583 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
CDPF1-203ENST00000404583 TNRC18O15417 2968 aaPredicted RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 CNMDO75829 334 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 MCCP23508 829 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 LBX2Q6XYB7 198 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 GPRC5AQ8NFJ5 357 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 GTF3C2Q8WUA4 911 aaPredicted RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
CDPF1-203ENST00000404583 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
CDPF1-203ENST00000404583 FMNL1O95466 1100 aaPredicted RBP17.15■□□□□ 0.34
CDPF1-203ENST00000404583 BMP3P12645 472 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 RGS19P49795 217 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 ERVK-24P63145 666 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 ARHGEF6Q15052 776 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
CDPF1-203ENST00000404583 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 ATG4CQ96DT6 458 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 BTBD7Q9P203 1132 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 TNKSO95271 1327 aa17.15■□□□□ 0.34
CDPF1-203ENST00000404583 SLC1A4P43007 532 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 FCGRTP55899 365 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 ENAHQ8N8S7 591 aaPredicted RBP17.14■□□□□ 0.33
CDPF1-203ENST00000404583 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 UBAC1Q9BSL1 405 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
CDPF1-203ENST00000404583 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
CDPF1-203ENST00000404583 REC8O95072 547 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
CDPF1-203ENST00000404583 RNF20Q5VTR2 975 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
CDPF1-203ENST00000404583 ANKS1AQ92625 1134 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 A0A0G2JMZ2 1700 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 TMEM232C9JQI7 657 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 TNPO2O14787 897 aaKnown RBP17.13■□□□□ 0.33
CDPF1-203ENST00000404583 SEC23AQ15436 765 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 PKN2Q16513 984 aaKnown RBP17.13■□□□□ 0.33
CDPF1-203ENST00000404583 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
CDPF1-203ENST00000404583 KIFC2Q96AC6 838 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 PORCNQ9H237 461 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 FEM1BQ9UK73 627 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 PTPN22Q9Y2R2 807 aa17.13■□□□□ 0.33
CDPF1-203ENST00000404583 VWA5AO00534 786 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
CDPF1-203ENST00000404583 GNRH1P01148 92 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 ANTXR2P58335 489 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 IFIT1BQ5T764 474 aaKnown RBP17.12■□□□□ 0.33
CDPF1-203ENST00000404583 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
CDPF1-203ENST00000404583 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 DCAF4Q8WV16 495 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 GABRQQ9UN88 632 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
CDPF1-203ENST00000404583 CENPFP49454 3210 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
CDPF1-203ENST00000404583 PDHBP11177 359 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 HOXD10P28358 340 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 STAT2P52630 851 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 IKQ13123 557 aaPredicted RBP17.11■□□□□ 0.33
CDPF1-203ENST00000404583 PLS1Q14651 629 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
CDPF1-203ENST00000404583 CHURC1Q8WUH1 139 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 SPATC1LQ9H0A9 340 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
CDPF1-203ENST00000404583 ERICH2A1L162 156 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
CDPF1-203ENST00000404583 HSPA4P34932 840 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 CCNA1P78396 465 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 PRKCZQ05513 592 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 TTBK2Q6IQ55 1244 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 REPS2Q8NFH8 660 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 IGDCC4Q8TDY8 1250 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 COA7Q96BR5 231 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 MOV10L1Q9BXT6 1211 aaKnown RBP17.1■□□□□ 0.33
CDPF1-203ENST00000404583 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 SENP2Q9HC62 589 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 PTCH2Q9Y6C5 1203 aa17.1■□□□□ 0.33
CDPF1-203ENST00000404583 PLXNB2O15031 1838 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms