RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
CLIP4-204ENST00000404424 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
CLIP4-204ENST00000404424 BAZ2AQ9UIF9 1905 aaKnown RBP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 FXR1P51114 621 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 ITPK1Q13572 414 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 DDB1Q16531 1140 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 CYP26C1Q6V0L0 522 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 DCP1AQ9NPI6 582 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 CTAGE9A4FU28 777 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 SASH3O75995 380 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
CLIP4-204ENST00000404424 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
CLIP4-204ENST00000404424 SCN7AQ01118 1682 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 H7C1D1 291 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 RGL2O15211 777 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 RPN1P04843 607 aaKnown RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MCM7P33993 719 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 CCT6AP40227 531 aaKnown RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 ZNF569Q5MCW4 686 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MTRQ99707 1265 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 ZBTB22O15209 634 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MYL1P05976 194 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 TUBBP07437 444 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MECOMQ03112 1051 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 SMC1AQ14683 1233 aaKnown RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MSANTD4Q8NCY6 345 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 STAMQ92783 540 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 FUT8Q9BYC5 575 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 RAB21Q9UL25 225 aa12.12□□□□□ -0.47
CLIP4-204ENST00000404424 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
CLIP4-204ENST00000404424 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 USP5P45974 858 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 IL17AQ16552 155 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 WWC2Q6AWC2 1192 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 NAPGQ99747 312 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-204ENST00000404424 COL4A1P02462 1669 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 MAP2K7O14733 419 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 ERLIN1O75477 346 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 ERVK-24P63145 666 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 WHAMMP3Q1A5X7 153 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 SLC10A5Q5PT55 438 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 VPS16Q9H269 839 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 PCDHA4Q9UN74 947 aa12.11□□□□□ -0.47
CLIP4-204ENST00000404424 A0A0G2JS52 829 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 OAS2P29728 719 aaKnown RBP12.1□□□□□ -0.47
CLIP4-204ENST00000404424 STAT6P42226 847 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 GNAQP50148 359 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 GPS2Q13227 327 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 KCNB1Q14721 858 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 GALNT17Q6IS24 598 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 LAMB1P07942 1786 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
CLIP4-204ENST00000404424 A0A1W2PQC6 194 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 NMT2O60551 498 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
CLIP4-204ENST00000404424 KRT9P35527 623 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 PRCPP42785 496 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 ADSSL1Q8N142 457 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 ANKRD2Q9GZV1 360 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
CLIP4-204ENST00000404424 WTIPA6NIX2 430 aaPredicted RBP12.09□□□□□ -0.47
CLIP4-204ENST00000404424 LAD1O00515 517 aa12.09□□□□□ -0.47
CLIP4-204ENST00000404424 POLR3GO15318 223 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms