RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 FRMPD2Q68DX3 1309 aaPredicted RBP38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 GOLGA8HP0CJ92 632 aa38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 BMP3P12645 472 aa38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 CCDC96Q2M329 555 aa38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 ZNF274Q96GC6 653 aaPredicted RBP38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 HPS5Q9UPZ3 1129 aa38.86■■■■□ 3.81
CSNK1E-204ENST00000403904 MANSC4A6NHS7 340 aaPredicted RBP38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 WDR46O15213 610 aaKnown RBP38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 AOC2O75106 756 aa38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 CALM1P0DP23 149 aa38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 CALM2P0DP24 149 aa38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 CALM3P0DP25 149 aa38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 RPAP3Q9H6T3 665 aaPredicted RBP38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 LIMCH1Q9UPQ0 1083 aa38.85■■■■□ 3.81
CSNK1E-204ENST00000403904 STK3Q13188 491 aa38.84■■■■□ 3.81
CSNK1E-204ENST00000403904 NOGQ13253 232 aa38.84■■■■□ 3.81
CSNK1E-204ENST00000403904 GRM4Q14833 912 aa38.84■■■■□ 3.81
CSNK1E-204ENST00000403904 PARP1P09874 1014 aaKnown RBP38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 VEGFBP49765 207 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 ZNF543Q08ER8 600 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 GPAT2Q6NUI2 795 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 FANCBQ8NB91 859 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 GPCPD1Q9NPB8 672 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 MAD2L2Q9UI95 211 aa38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 WDR33Q9C0J8 1336 aaKnown RBP38.83■■■■□ 3.81
CSNK1E-204ENST00000403904 LARGE1O95461 756 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 METAP2P50579 478 aaKnown RBP eCLIP38.82■■■■□ 3.812e-6■■■□□ 18.9
CSNK1E-204ENST00000403904 KIF23Q02241 960 aaPredicted RBP38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 ME3Q16798 604 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 STAG2Q8N3U4 1231 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 CTCFLQ8NI51 663 aaPredicted RBP38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 MAP3K14Q99558 947 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 PTPN18Q99952 460 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 AGTPBP1Q9UPW5 1226 aa38.82■■■■□ 3.81
CSNK1E-204ENST00000403904 TESPA1A2RU30 521 aaPredicted RBP38.82■■■■□ 3.8
CSNK1E-204ENST00000403904 GOLGA8AA7E2F4 631 aa38.82■■■■□ 3.8
CSNK1E-204ENST00000403904 CCT2P78371 535 aaKnown RBP38.82■■■■□ 3.8
CSNK1E-204ENST00000403904 TANGO6Q9C0B7 1094 aa38.82■■■■□ 3.8
CSNK1E-204ENST00000403904 PCNTO95613 3336 aa38.81■■■■□ 3.8
CSNK1E-204ENST00000403904 BTBD19C9JJ37 291 aa38.81■■■■□ 3.8
CSNK1E-204ENST00000403904 RCAN1P53805 252 aa38.81■■■■□ 3.8
CSNK1E-204ENST00000403904 PALM3A6NDB9 673 aaPredicted RBP38.8■■■■□ 3.8
CSNK1E-204ENST00000403904 ASPRV1Q53RT3 343 aa38.8■■■■□ 3.8
CSNK1E-204ENST00000403904 TTBK2Q6IQ55 1244 aa38.8■■■■□ 3.8
CSNK1E-204ENST00000403904 CEP350Q5VT06 3117 aa38.8■■■■□ 3.8
CSNK1E-204ENST00000403904 TMEM232C9JQI7 657 aa38.79■■■■□ 3.8
CSNK1E-204ENST00000403904 MCM2P49736 904 aa38.79■■■■□ 3.8
CSNK1E-204ENST00000403904 RTN1Q16799 776 aa38.79■■■■□ 3.8
CSNK1E-204ENST00000403904 GPATCH4Q5T3I0 446 aaKnown RBP38.79■■■■□ 3.8
CSNK1E-204ENST00000403904 NCOA5Q9HCD5 579 aaKnown RBP38.79■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L15C9J2P7 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L13C9JLJ4 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L11C9JVI0 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L18D6R9N7 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L22D6RA61 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L17D6RBQ6 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L19D6RCP7 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L20D6RJB6 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 KIF5BP33176 963 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 USP17L24Q0WX57 530 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 CATSPERGQ6ZRH7 1159 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 SLKQ9H2G2 1235 aaPredicted RBP38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 FAM217BQ9NTX9 383 aaPredicted RBP38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 FBXO28Q9NVF7 368 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 CDC27P30260 824 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 INHBEP58166 350 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 FAM43AQ8N2R8 423 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 CPVLQ9H3G5 476 aa38.78■■■■□ 3.8
CSNK1E-204ENST00000403904 KLRF2D3W0D1 207 aa38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 HOXA7P31268 230 aaPredicted RBP38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 ADD1P35611 737 aaKnown RBP38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 SREBF2Q12772 1141 aa38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 IKQ13123 557 aaPredicted RBP38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 NECAB1Q8N987 351 aa38.77■■■■□ 3.8
CSNK1E-204ENST00000403904 NID2Q14112 1375 aa38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 IGF2BP3O00425 579 aaKnown RBP eCLIP38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 PFKFB2O60825 505 aa38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 SLC16A2P36021 539 aa38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 SAMD1Q6SPF0 538 aaPredicted RBP38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 ANKRD23Q86SG2 305 aa38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 ZSCAN31Q96LW9 406 aaPredicted RBP38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 UBA5Q9GZZ9 404 aa38.76■■■■□ 3.8
CSNK1E-204ENST00000403904 PDHXO00330 501 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 FLOT1O75955 427 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 STAT2P52630 851 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 SCRN1Q12765 414 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 CMTR1Q8N1G2 835 aaKnown RBP38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 TSHZ2Q9NRE2 1034 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 FEM1BQ9UK73 627 aa38.75■■■■□ 3.79
CSNK1E-204ENST00000403904 PLEKHA8P1O95397 391 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 TM4SF4P48230 202 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 SNX21Q969T3 373 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 RBM28Q9NW13 759 aaKnown RBP38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 PARP14Q460N5 1801 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 PABPC4Q13310 644 aaKnown RBP eCLIP38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 NBPF11Q86T75 865 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 IFNL1Q8IU54 200 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 TMX3Q96JJ7 454 aa38.74■■■■□ 3.79
CSNK1E-204ENST00000403904 RLFQ13129 1914 aa38.73■■■■□ 3.79
CSNK1E-204ENST00000403904 BAZ2BQ9UIF8 2168 aaKnown RBP38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms