RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 KCNH1O95259 989 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 PPP2R2AP63151 447 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 RNF4P78317 190 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 CLEC10AQ8IUN9 316 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 JMYQ8N9B5 988 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 FAM181AQ8N9Y4 354 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 ZBTB38Q8NAP3 1195 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 BTN2A2Q8WVV5 523 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 GPATCH3Q96I76 525 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 FAM83CQ9BQN1 747 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 GBP3Q9H0R5 595 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 PRDM5Q9NQX1 630 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 AKT3Q9Y243 479 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 PCDHB12Q9Y5F1 795 aa5.66□□□□□ -1.5
HMGB1P17-201ENST00000403495 SHISA3A0PJX4 238 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 FAM181BA6NEQ2 426 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 WASH4PA8MWX3 477 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 AGRPO00253 132 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 VAMP4O75379 141 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 PPM1BO75688 479 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 ITGB2P05107 769 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 ITGA4P13612 1032 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 CANXP27824 592 aaKnown RBP5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 GATA4P43694 442 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 NOL9Q5SY16 702 aaKnown RBP5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 ZAR1Q86SH2 424 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 LRRC47Q8N1G4 583 aaKnown RBP5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 FIBCD1Q8N539 461 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 DTWD2Q8NBA8 298 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 PUS7Q96PZ0 661 aaKnown RBP5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 ASPNQ9BXN1 380 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 EPN3Q9H201 632 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 TPSG1Q9NRR2 321 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 WHRNQ9P202 907 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 STOML1Q9UBI4 398 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 CGGBP1Q9UFW8 167 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 RAXQ9Y2V3 346 aa5.65□□□□□ -1.5
HMGB1P17-201ENST00000403495 BLACEA4D250 179 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 IQCA1LA6NCM1 817 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 PPM1GO15355 546 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 PRODHO43272 600 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 PRAMEF1O95521 474 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 F13BP05160 661 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 ITIH2P19823 946 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 ZNF143P52747 638 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 GYS2P54840 703 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 TNK2Q07912 1038 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 DPY19L1Q2PZI1 675 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 SFRP5Q5T4F7 317 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 OGFOD3Q6PK18 319 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 BVESQ8NE79 360 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 ZSWIM2Q8NEG5 633 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 ZNF669Q96BR6 464 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 MRGPRX3Q96LB0 322 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 CDC6Q99741 560 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 IER2Q9BTL4 223 aa5.64□□□□□ -1.51
HMGB1P17-201ENST00000403495 TRAV20A0A0B4J274 112 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 H0Y8X5 98 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 CLSTN1O94985 981 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 NAT2P11245 290 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 CYP7A1P22680 504 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 GSK3AP49840 483 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 PRSS53Q2L4Q9 553 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 ANKRD39Q53RE8 183 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 TMEM67Q5HYA8 995 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 CDKAL1Q5VV42 579 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 GPAT2Q6NUI2 795 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 PRR23CQ6ZRP0 262 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 KIAA0907Q7Z7F0 614 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 ALYREFQ86V81 257 aaKnown RBP5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 TRIM59Q8IWR1 403 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 DHX37Q8IY37 1157 aaKnown RBP5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 DSCC1Q9BVC3 393 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 LRRC4CQ9HCJ2 640 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 GPR55Q9Y2T6 319 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 EMC9Q9Y3B6 208 aa5.63□□□□□ -1.51
HMGB1P17-201ENST00000403495 TRBV23-1A0A0A0MS06 115 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 NOP56O00567 594 aaKnown RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 RASSF7Q02833 373 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 DOC2BQ14184 412 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 HSP90AA2PQ14568 343 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 GTF2IRD2BQ6EKJ0 949 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 CRTC3Q6UUV7 619 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 GTF2IRD2Q86UP8 949 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 ARHGEF39Q8N4T4 335 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 KISS1RQ969F8 398 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 SGSM3Q96HU1 749 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms