RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 ASIC3Q9UHC3 531 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 BCRP11274 1271 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 ADRA2BP18089 450 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 TXKP42681 527 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 BLVRAP53004 296 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 HSP90AA5PQ58FG0 334 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 SH2D4BQ5SQS7 431 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 CERS3Q8IU89 383 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 BUB1BO60566 1050 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 PDE8AO60658 829 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 COA7Q96BR5 231 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 CTTNBP2NLQ9P2B4 639 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 ZNF18P17022 549 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 MAN1A1P33908 653 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 RNASE9P60153 205 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 MAIP1Q8WWC4 291 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 SECISBP2LQ93073 1101 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 CDR2Q01850 454 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 PAK1Q13153 545 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 NLGN1Q8N2Q7 840 aa12.18□□□□□ -0.46
CACNA1C-221ENST00000402845 VPS41P49754 854 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 ARMT1Q9H993 441 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 DNM3Q9UQ16 869 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 TMEM87BQ96K49 555 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 RBSNQ9H1K0 784 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 MRPL46Q9H2W6 279 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 MAP3K7O43318 606 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 GCNT3O95395 438 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 PUM3Q15397 648 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 TNNI1P19237 187 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 PHLDB2Q86SQ0 1253 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 BCAMP50895 628 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 LINS1Q8NG48 757 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 NUCKS1Q9H1E3 243 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 WDR62O43379 1518 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 KDM5DQ9BY66 1539 aa12.17□□□□□ -0.46
CACNA1C-221ENST00000402845 TSNAXIP1Q2TAA8 658 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 B4E1Z4 1266 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TXNDC9O14530 226 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 KRT3P12035 628 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 MRPL44Q9H9J2 332 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 USH1CQ9Y6N9 552 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 RAD17O75943 681 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 KCNA6P17658 529 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 EVCP57679 992 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 KRT81Q14533 505 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 CWF19L2Q2TBE0 894 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 PGBD3Q8N328 593 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 BCAP29Q9UHQ4 241 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 HMGB1P1B2RPK0 211 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 CALCRLQ16602 461 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 DPF3Q92784 378 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 TESK2Q96S53 571 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
CACNA1C-221ENST00000402845 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 CPSF2Q9P2I0 782 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 MYO1AQ9UBC5 1043 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 KDM5CP41229 1560 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 TRIM31Q9BZY9 425 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 TNNC2P02585 160 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 KRBA2Q6ZNG9 492 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 MTMR3Q13615 1198 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 RSAD2Q8WXG1 361 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-221ENST00000402845 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms