RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 PRDM1O75626 825 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 ATP2B1P20020 1258 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 SMARCA1P28370 1054 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 GRAPQ13588 217 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 GRM4Q14833 912 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 CRY2Q49AN0 593 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 CDKAL1Q5VV42 579 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 ZNF804AQ7Z570 1209 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 GRAPLQ8TC17 118 aaPredicted RBP14.78□□□□□ -0.04
PRAME-203ENST00000402697 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
PRAME-203ENST00000402697 LRRC10BA6NIK2 292 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 SERPINB2P05120 415 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 PLCG2P16885 1265 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.04
PRAME-203ENST00000402697 PRDX5P30044 214 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 E2F4Q16254 413 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 RCSD1Q6JBY9 416 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 SYT10Q6XYQ8 523 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 REXO1L1PQ8IX06 675 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 BLIDQ8IZY5 108 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 ANKRD20A12PQ8NF67 263 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 MAGEF1Q9HAY2 307 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 MCM9Q9NXL9 1143 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 PCDHA4Q9UN74 947 aa14.77□□□□□ -0.04
PRAME-203ENST00000402697 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.77□□□□□ -0.042e-28■□□□□ 9.6
PRAME-203ENST00000402697 XDHP47989 1333 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 LTBP1Q14766 1721 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 AKR1B15C9JRZ8 316 aaPredicted RBP14.77□□□□□ -0.05
PRAME-203ENST00000402697 SMIM22K7EJ46 135 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 POLRMTO00411 1230 aaKnown RBP14.77□□□□□ -0.05
PRAME-203ENST00000402697 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
PRAME-203ENST00000402697 TUBB2AQ13885 445 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 TRIM14Q14142 442 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 ZNF174Q15697 407 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 USP49Q70CQ1 688 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 EPSTI1Q96J88 318 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 TUBB2BQ9BVA1 445 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 DNAI1Q9UI46 699 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 PPP2R2CQ9Y2T4 447 aa14.77□□□□□ -0.05
PRAME-203ENST00000402697 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 PRPHP41219 470 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 USP5P45974 858 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
PRAME-203ENST00000402697 TRIM65Q6PJ69 517 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 PPFIBP1Q86W92 1011 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 CCDC12Q8WUD4 166 aaPredicted RBP14.76□□□□□ -0.05
PRAME-203ENST00000402697 CUEDC2Q9H467 287 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 RWDD2AQ9UIY3 292 aa14.76□□□□□ -0.05
PRAME-203ENST00000402697 DDX41Q9UJV9 622 aaKnown RBP14.76□□□□□ -0.05
PRAME-203ENST00000402697 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 RXRBP28702 533 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 TUBB4BP68371 445 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 ST5P78524 1137 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 TFAP4Q01664 338 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 PNMA1Q8ND90 353 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 ADD3Q9UEY8 706 aaKnown RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 A0A087X0B3 334 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 FAM205CA6NFA0 338 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 PPP1R3GB7ZBB8 358 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 APBA3O96018 575 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 PBX1P40424 430 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 PPP1R2P41236 205 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 UTP14CQ5TAP6 766 aaKnown RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 PDXDC2PQ6P474 469 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 PIK3AP1Q6ZUJ8 805 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 CNGA4Q8IV77 575 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 ZNF444Q8N0Y2 327 aaPredicted RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
PRAME-203ENST00000402697 LIMA1Q9UHB6 759 aaKnown RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
PRAME-203ENST00000402697 FECHP22830 423 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 AFMP43652 599 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 FAM193AP78312 1265 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 KCNB1Q14721 858 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 APTXQ7Z2E3 356 aaKnown RBP14.74□□□□□ -0.05
PRAME-203ENST00000402697 MED15Q96RN5 788 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 SAMSN1Q9NSI8 373 aaKnown RBP14.74□□□□□ -0.05
PRAME-203ENST00000402697 JAG2Q9Y219 1238 aa14.74□□□□□ -0.05
PRAME-203ENST00000402697 EFCAB8A8MWE9 144 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 M0R2N6 131 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 ATP2B4P23634 1241 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 GRAMD1CQ8IYS0 662 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
PRAME-203ENST00000402697 AK8Q96MA6 479 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 SPZ1Q9BXG8 430 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
PRAME-203ENST00000402697 ANKIB1Q9P2G1 1089 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 NAV1Q8NEY1 1877 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 CCDC194A0A1B0GVG4 234 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 H7C1D1 291 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 hCG_1984214I3L0E3 225 aa14.73□□□□□ -0.05
PRAME-203ENST00000402697 CCDC175P0C221 793 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms