RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 PP2D1A8MPX8 630 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 WNT7AO00755 349 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 CLGNO14967 610 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 IDEP14735 1019 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 ERCC5P28715 1186 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-201ENST00000401921 KRT9P35527 623 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 PPP2R3AQ06190 1150 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 SF3B3Q15393 1217 aaKnown RBP8.68□□□□□ -1.02
HDAC9-201ENST00000401921 CNPY4Q8N129 248 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 GSDMAQ96QA5 445 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
HDAC9-201ENST00000401921 UFL1O94874 794 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 TUBB4AP04350 444 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 GNAQP50148 359 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 TEX11Q8IYF3 940 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 CNBD1Q8NA66 436 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 GDAQ9Y2T3 454 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MYO5AQ9Y4I1 1855 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MPHOSPH10O00566 681 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 CCNT1O60563 726 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 CD44P16070 742 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MTIF2P46199 727 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 ASIC1P78348 528 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SYCP1Q15431 976 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 TRAPPC3LQ5T215 181 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 WWC2Q6AWC2 1192 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SAMD1Q6SPF0 538 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 ZNF804AQ7Z570 1209 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 TC2NQ8N9U0 490 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 WDR24Q96S15 920 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SRRTQ9BXP5 876 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 UBA5Q9GZZ9 404 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 HSD3B7Q9H2F3 369 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 ZNF287Q9HBT7 754 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 RMND1Q9NWS8 449 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 GUCA1BQ9UMX6 200 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 THRAP3Q9Y2W1 955 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 KLRF2D3W0D1 207 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MYO1BO43795 1136 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 SEC31AO94979 1220 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MDM2Q00987 491 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 CCDC148Q8NFR7 591 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 MTA3Q9BTC8 594 aa8.67□□□□□ -1.02
HDAC9-201ENST00000401921 ZNHIT6Q9NWK9 470 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
HDAC9-201ENST00000401921 ATRNO75882 1429 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 KDM4FA0A1W2PPD8 638 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 PSMA7O14818 248 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 RPN1P04843 607 aaKnown RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TRIM21P19474 475 aaKnown RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 CLCN6P51797 869 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 GSTO1P78417 241 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 SPAG1Q07617 926 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 CNGA4Q8IV77 575 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TANGO6Q9C0B7 1094 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 ZHX3Q9H4I2 956 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 INTS13Q9NVM9 706 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 BCCIPQ9P287 314 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TJP1Q07157 1748 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TRIM49BA6NDI0 452 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 KCNJ18B7U540 433 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 MYCNP04198 464 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 RHOXF2BP0C7M4 288 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 PCP11498 1178 aaKnown RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TXKP42681 527 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 KCNJ12Q14500 433 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 USP17L2Q6R6M4 530 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 REXO1L1PQ8IX06 675 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 ACRBPQ8NEB7 543 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 RHOXF2Q9BQY4 288 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-201ENST00000401921 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 ANAPC4Q9UJX5 808 aa8.66□□□□□ -1.02
HDAC9-201ENST00000401921 SEMA3EO15041 775 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 GTPBP6O43824 516 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 RCAN1P53805 252 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 NAP1L1P55209 391 aaKnown RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 NFIXQ14938 502 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 EYA3Q99504 573 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 PYM1Q9BRP8 204 aaKnown RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 ARFGAP3Q9NP61 516 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 ST7Q9NRC1 585 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 EXOC1Q9NV70 894 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 BIN2Q9UBW5 565 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-201ENST00000401921 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 SMCO2A6NFE2 343 aa8.65□□□□□ -1.02
HDAC9-201ENST00000401921 RPS6KA4O75676 772 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms