RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 DHX40Q8IX18 779 aaKnown RBP20.81■□□□□ 0.92
GAREM2-201ENST00000401533 KCNB2Q92953 911 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 CHMP2AO43633 222 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 DPF2Q92785 391 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 HPS5Q9UPZ3 1129 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 SPDYE3A6NKU9 549 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 PPP1R12BO60237 982 aaPredicted RBP20.81■□□□□ 0.92
GAREM2-201ENST00000401533 TBCAO75347 108 aaKnown RBP20.81■□□□□ 0.92
GAREM2-201ENST00000401533 SYCP3Q8IZU3 236 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 SLC39A2Q9NP94 309 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 ATP8A2Q9NTI2 1148 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
GAREM2-201ENST00000401533 MORC3Q14149 939 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 DPP8Q6V1X1 898 aaPredicted RBP20.8■□□□□ 0.92
GAREM2-201ENST00000401533 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
GAREM2-201ENST00000401533 KCNJ18B7U540 433 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 KCNJ12Q14500 433 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 IGDCC4Q8TDY8 1250 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 ALS2CR12Q96Q35 445 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 USP40Q9NVE5 1235 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.8■□□□□ 0.92
GAREM2-201ENST00000401533 CHMP4BP1P59074 171 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 NLRC4Q9NPP4 1024 aa20.8■□□□□ 0.92
GAREM2-201ENST00000401533 SLC1A4P43007 532 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 GRIN1Q05586 938 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 BICDL2A1A5D9 508 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 H0YHG0 523 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 TSPYL1Q9H0U9 437 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 MRPL12P52815 198 aaKnown RBP20.79■□□□□ 0.92
GAREM2-201ENST00000401533 CALCRLQ16602 461 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 STAG1Q8WVM7 1258 aa20.79■□□□□ 0.92
GAREM2-201ENST00000401533 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
GAREM2-201ENST00000401533 PTPREP23469 700 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 DCAF17Q5H9S7 520 aaPredicted RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 FAM84BQ96KN1 310 aaPredicted RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 TIGD1Q96MW7 591 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 IKBKBO14920 756 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 SLC16A2P36021 539 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 SSR1P43307 286 aaKnown RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 DNAJC21Q5F1R6 531 aaKnown RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 HERC4Q5GLZ8 1057 aaPredicted RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 SRPRBQ9Y5M8 271 aaKnown RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 SLFN14P0C7P3 912 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 ITPK1Q13572 414 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 RESP18Q5W5W9 173 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 NEK11Q8NG66 645 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 SOWAHDA6NJG2 315 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 KIF20AO95235 890 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 RPN1P04843 607 aaKnown RBP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 KRT83P78385 493 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 CTR9Q6PD62 1173 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 CEP112Q8N8E3 955 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 COA7Q96BR5 231 aa20.78■□□□□ 0.92
GAREM2-201ENST00000401533 BCCIPQ9P287 314 aaKnown RBP eCLIP20.78■□□□□ 0.92
GAREM2-201ENST00000401533 RBL2Q08999 1139 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 TXLNBQ8N3L3 684 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 ANKRD13CQ8N6S4 541 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 CDC25BP30305 580 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 PTPROQ16827 1216 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 MAP9Q49MG5 647 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 MAEAQ7L5Y9 396 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 KRT25Q7Z3Z0 450 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 GDAQ9Y2T3 454 aa20.77■□□□□ 0.92
GAREM2-201ENST00000401533 GOLGA6L10A6NI86 522 aa20.77■□□□□ 0.91
GAREM2-201ENST00000401533 WTIPA6NIX2 430 aaPredicted RBP20.77■□□□□ 0.91
GAREM2-201ENST00000401533 ADCY7P51828 1080 aa20.77■□□□□ 0.91
GAREM2-201ENST00000401533 CYP26C1Q6V0L0 522 aa20.77■□□□□ 0.91
GAREM2-201ENST00000401533 VPS18Q9P253 973 aa20.77■□□□□ 0.91
GAREM2-201ENST00000401533 TACC1O75410 805 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 RAPGEF1Q13905 1077 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 SH3RF3Q8TEJ3 882 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-201ENST00000401533 DDAH1O94760 285 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 MARCH10Q8NA82 808 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-201ENST00000401533 NAPGQ99747 312 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-201ENST00000401533 DCP1AQ9NPI6 582 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-201ENST00000401533 RFX7Q2KHR2 1363 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-201ENST00000401533 PAGE5Q96GU1 130 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
GAREM2-201ENST00000401533 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
GAREM2-201ENST00000401533 TUBB4AP04350 444 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 SP4Q02446 784 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 VPS36Q86VN1 386 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 METTL16Q86W50 562 aaKnown RBP20.75■□□□□ 0.91
GAREM2-201ENST00000401533 TMTC1Q8IUR5 882 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 EPC1Q9H2F5 836 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 ENC1O14682 589 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 TYW1BQ6NUM6 668 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 SARM1Q6SZW1 724 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 PIGSQ96S52 555 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 SPTLC3Q9NUV7 552 aa20.75■□□□□ 0.91
GAREM2-201ENST00000401533 SEC31AO94979 1220 aaKnown RBP20.75■□□□□ 0.91
GAREM2-201ENST00000401533 ACRBPQ8NEB7 543 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms