RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
CHD8-201ENST00000399982 FAM186BQ8IYM0 893 aa9.18□□□□□ -0.94
CHD8-201ENST00000399982 IWS1Q96ST2 819 aa9.18□□□□□ -0.94
CHD8-201ENST00000399982 INTS9Q9NV88 658 aaKnown RBP9.18□□□□□ -0.94
CHD8-201ENST00000399982 ASIC3Q9UHC3 531 aa9.18□□□□□ -0.94
CHD8-201ENST00000399982 PACSIN2Q9UNF0 486 aaPredicted RBP9.18□□□□□ -0.94
CHD8-201ENST00000399982 CALUO43852 315 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 SUCLA2Q9P2R7 463 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 RASGRF2O14827 1237 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 NVLO15381 856 aaKnown RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 ZNF202O95125 648 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 HLA-DPA1P20036 260 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 TNFAIP3P21580 790 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 KSR1Q8IVT5 923 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 CCDC138Q96M89 665 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 KCNG1Q9UIX4 513 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 DCTN3O75935 186 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 PNMA6AP0CW24 399 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 MARCKSP29966 332 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 GRAMD4Q6IC98 578 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 PPP1R2P3Q6NXS1 205 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 RSBN1LQ6PCB5 846 aaPredicted RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 TMEM63CQ9P1W3 806 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 RPS6KB1P23443 525 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 LRRC8CQ8TDW0 803 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 MAGEF1Q9HAY2 307 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 TMOD3Q9NYL9 352 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 ARHGEF9O43307 516 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 CSPG5O95196 566 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 CUL1Q13616 776 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 PRAM1Q96QH2 718 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 KIF9Q9HAQ2 790 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 MRPL40Q9NQ50 206 aaKnown RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 TTC4O95801 387 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 SFMBT2Q5VUG0 894 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 TEX11Q8IYF3 940 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 SERPINI1Q99574 410 aa9.17□□□□□ -0.94
CHD8-201ENST00000399982 CRNKL1Q9BZJ0 848 aaKnown RBP9.17□□□□□ -0.94
CHD8-201ENST00000399982 RWDD2BP57060 319 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 RIC8AQ9NPQ8 531 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 TOP2BQ02880 1626 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 SYNDIG1LA6NDD5 238 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 XPO4Q9C0E2 1151 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 PALMDQ9NP74 551 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 DEXIO95424 95 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 EEF1DP29692 281 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 NAPAP54920 295 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 POLE2P56282 527 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 STRN3Q13033 797 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 WDR48Q8TAF3 677 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 PAWRQ96IZ0 340 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 FGD4Q96M96 766 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 TRIM31Q9BZY9 425 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 PSD3Q9NYI0 1048 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 A0A1W2PQ27 194 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 A0A1W2PQ64 194 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 A0A1W2PQD8 194 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 BCRP11274 1271 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 POSTNQ15063 836 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 C10orf76Q5T2E6 689 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 NBPF5PQ86XG9 351 aaPredicted RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.16□□□□□ -0.943e-8■■■□□ 17.4
CHD8-201ENST00000399982 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 CABP1Q9NZU7 370 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 TRMT112Q9UI30 125 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 S100BP04271 92 aaPredicted RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 CCDC8Q9H0W5 538 aaPredicted RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 FNDC3AQ9Y2H6 1198 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 FRMD3A2A2Y4 597 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 GSTA4O15217 222 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 OCA2Q04671 838 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 MAML3Q96JK9 1138 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 PPP1R13BQ96KQ4 1090 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
CHD8-201ENST00000399982 STK25O00506 426 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 EIF3DO15371 548 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■■■□□ 17.7
CHD8-201ENST00000399982 NR1H3Q13133 447 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 KRT33BQ14525 404 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 CCDC105Q8IYK2 499 aa9.16□□□□□ -0.94
CHD8-201ENST00000399982 BEGAINQ9BUH8 593 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms